RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 COBLO75128 1261 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 GNAT2P19087 354 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 OLFML2BQ68BL8 750 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 B4GALNT3Q6L9W6 998 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 GIMAP6Q6P9H5 292 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 OTUD7AQ8TE49 926 aaPredicted RBP11.96□□□□□ -0.49
CPSF4-213ENST00000484112 DDRGK1Q96HY6 314 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 SEMA6BQ9H3T3 888 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 SLC5A4Q9NY91 659 aa11.96□□□□□ -0.49
CPSF4-213ENST00000484112 FLOT1O75955 427 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 CYP2D6P10635 497 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 DSG3P32926 999 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 IRX6P78412 446 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-213ENST00000484112 KIAA1755Q5JYT7 1200 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 TSHZ3Q63HK5 1081 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 AMOTL1Q8IY63 956 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 MAFAQ8NHW3 353 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-213ENST00000484112 SDR42E1Q8WUS8 393 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 FSD1Q9BTV5 496 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 COL6A3P12111 3177 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 FRMPD3Q5JV73 1810 aa11.95□□□□□ -0.5
CPSF4-213ENST00000484112 TRIM43BA6NCK2 446 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 MBD4O95243 580 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 IGHA2P01877 340 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 GABPAQ06546 454 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 LRRC41Q15345 812 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 FAM47AQ5JRC9 791 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 CLEC10AQ8IUN9 316 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 LCORLQ8N3X6 602 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 SHCBP1Q8NEM2 672 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 MYLIPQ8WY64 445 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 TRIM43Q96BQ3 446 aaPredicted RBP11.94□□□□□ -0.5
CPSF4-213ENST00000484112 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 MROH8Q9H579 483 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 DCP1AQ9NPI6 582 aaPredicted RBP11.94□□□□□ -0.5
CPSF4-213ENST00000484112 PDLIM7Q9NR12 457 aa11.94□□□□□ -0.5
CPSF4-213ENST00000484112 RAD21O60216 631 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 NEFLP07196 543 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 FCER1AP12319 257 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 TLE2Q04725 743 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 TMEM179Q6ZVK1 233 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 MB21D1Q8N884 522 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 MAML3Q96JK9 1138 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 STRBPQ96SI9 672 aaKnown RBP11.93□□□□□ -0.5
CPSF4-213ENST00000484112 PUS7LQ9H0K6 701 aaKnown RBP11.93□□□□□ -0.5
CPSF4-213ENST00000484112 ARMT1Q9H993 441 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 XPNPEP3Q9NQH7 507 aa11.93□□□□□ -0.5
CPSF4-213ENST00000484112 HIP1O00291 1037 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 PGK1P00558 417 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 PGK2P07205 417 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 RARBP10826 455 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 AKR1B1P15121 316 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 FOSL2P15408 326 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 SMAD3P84022 425 aaKnown RBP11.92□□□□□ -0.5
CPSF4-213ENST00000484112 ICA1Q05084 483 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 SNX17Q15036 470 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 ZMYM1Q5SVZ6 1142 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 CENPQQ7L2Z9 268 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-213ENST00000484112 RNPC3Q96LT9 517 aaKnown RBP11.92□□□□□ -0.5
CPSF4-213ENST00000484112 MMP19Q99542 508 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 TTYH1Q9H313 450 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-213ENST00000484112 HELLSQ9NRZ9 838 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 ARPP21Q9UBL0 812 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-213ENST00000484112 SWAP70Q9UH65 585 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 SLC4A4Q9Y6R1 1079 aa11.92□□□□□ -0.5
CPSF4-213ENST00000484112 NAV1Q8NEY1 1877 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 GPAA1O43292 621 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 PRKAB2O43741 272 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 PQBP1O60828 265 aaKnown RBP11.91□□□□□ -0.5
CPSF4-213ENST00000484112 CLTBP09497 229 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 RAG1P15918 1043 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 ITGB8P26012 769 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 TMEM132BQ14DG7 1078 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 SBK1Q52WX2 424 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 RNF180Q86T96 592 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 SIAH1Q8IUQ4 282 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 ABRAQ8N0Z2 381 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 OSBP2Q969R2 916 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 NACAP1Q9BZK3 213 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 SH2D4AQ9H788 454 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 VCPKMTQ9H867 229 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 TACC3Q9Y6A5 838 aa11.91□□□□□ -0.5
CPSF4-213ENST00000484112 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 PATL2C9JE40 543 aaKnown RBP11.9□□□□□ -0.5
CPSF4-213ENST00000484112 SLC25A27O95847 323 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 TAL1P17542 331 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-213ENST00000484112 EPHB4P54760 987 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 MFAP1P55081 439 aaKnown RBP11.9□□□□□ -0.5
CPSF4-213ENST00000484112 KCTD2Q14681 263 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 SLFNL1Q499Z3 407 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 C12orf60Q5U649 245 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms