RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 DBNDD2Q9BQY9 259 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 CCDC8Q9H0W5 538 aaPredicted RBP10.89□□□□□ -0.67
COL8A1-207ENST00000483969 DCTPP1Q9H773 170 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 NDFIP2Q9NV92 336 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 SERPINA10Q9UK55 444 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 PDS5AQ29RF7 1337 aaKnown RBP10.88□□□□□ -0.67
COL8A1-207ENST00000483969 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
COL8A1-207ENST00000483969 INHAP05111 366 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 LDHBP07195 334 aaKnown RBP10.88□□□□□ -0.67
COL8A1-207ENST00000483969 GDF10P55107 478 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 ANGEL2Q5VTE6 544 aaKnown RBP10.88□□□□□ -0.67
COL8A1-207ENST00000483969 KRT26Q7Z3Y9 468 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 AACSQ86V21 672 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 TEKT1Q969V4 418 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
COL8A1-207ENST00000483969 LRRCC1Q9C099 1032 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 IL1RAPL2Q9NP60 686 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 HMG20BQ9P0W2 317 aa10.88□□□□□ -0.67
COL8A1-207ENST00000483969 PASKQ96RG2 1323 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 PITPNM2Q9BZ72 1349 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 SALL1Q9NSC2 1324 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 TMEM88BA6NKF7 163 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 IGSF3O75054 1194 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 STAU1O95793 577 aaKnown RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 ARID4AP29374 1257 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 SOX11P35716 441 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 CRKP46108 304 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 SNRPNP63162 240 aaKnown RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 RASGRF1Q13972 1273 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 HHIPL2Q6UWX4 724 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 SPATA5Q8NB90 893 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 EDARADDQ8WWZ3 215 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 ZBED3Q96IU2 234 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 PRMT6Q96LA8 375 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 NIFKQ9BYG3 293 aaKnown RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 GLIS2Q9BZE0 524 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 RWDD1Q9H446 243 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 GGA3Q9NZ52 723 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 ABCF2Q9UG63 623 aa10.87□□□□□ -0.67
COL8A1-207ENST00000483969 DBNLQ9UJU6 430 aaKnown RBP10.87□□□□□ -0.67
COL8A1-207ENST00000483969 PIK3R2O00459 728 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 ITGB2P05107 769 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 LDHCP07864 332 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 GRIK5Q16478 980 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 ERICH6Q7L0X2 663 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 APOBEC3FQ8IUX4 373 aaKnown RBP10.86□□□□□ -0.67
COL8A1-207ENST00000483969 PLPP7Q8NBV4 271 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 EXOC6Q8TAG9 804 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 GDPD2Q9HCC8 539 aa10.86□□□□□ -0.67
COL8A1-207ENST00000483969 TRAF5O00463 557 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 BNIP3LO60238 219 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 PROCP04070 461 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 ATP4AP20648 1035 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 ABL2P42684 1182 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 GSTO1P78417 241 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 HDAC1Q13547 482 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-207ENST00000483969 TPRNQ4KMQ1 711 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 C1orf229Q6ZS94 237 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-207ENST00000483969 NLRP8Q86W28 1048 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 DZIP1Q86YF9 867 aaKnown RBP10.85□□□□□ -0.67
COL8A1-207ENST00000483969 GCC1Q96CN9 775 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 ZDHHC15Q96MV8 337 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 LRP2BPQ9P2M1 347 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 SCN4AP35499 1836 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
COL8A1-207ENST00000483969 ASTN2O75129 1339 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-207ENST00000483969 ADM5C9JUS6 153 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
COL8A1-207ENST00000483969 AMPD1P23109 780 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 PRDX5P30044 214 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 NF2P35240 595 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 MCAMP43121 646 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 TNNI2P48788 182 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 TNFAIP1Q13829 316 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 C2orf69Q8N8R5 385 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 TDRD3Q9H7E2 651 aaKnown RBP10.84□□□□□ -0.67
COL8A1-207ENST00000483969 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 VEZTQ9HBM0 779 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 TLR7Q9NYK1 1049 aaKnown RBP10.84□□□□□ -0.67
COL8A1-207ENST00000483969 TMOD2Q9NZR1 351 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 RAI14Q9P0K7 980 aa10.84□□□□□ -0.67
COL8A1-207ENST00000483969 ZNF70Q9UC06 446 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-207ENST00000483969 CLRN2A0PK11 232 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-207ENST00000483969 ARAFP10398 606 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 ZAP70P43403 619 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 SMTNP53814 917 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 FMR1Q06787 632 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL8A1-207ENST00000483969 SEMA3FQ13275 785 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 TTF1Q15361 905 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-207ENST00000483969 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 CST9Q5W186 159 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 APOBEC3HQ6NTF7 200 aaKnown RBP10.83□□□□□ -0.68
COL8A1-207ENST00000483969 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL8A1-207ENST00000483969 CDCA5Q96FF9 252 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 GPATCH3Q96I76 525 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 DEFB129Q9H1M3 183 aa10.83□□□□□ -0.68
COL8A1-207ENST00000483969 DNAAF2Q9NVR5 837 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms