RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 FAAP100Q0VG06 881 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 TMED8Q6PL24 325 aaPredicted RBP15.63■□□□□ 0.09
UBR4-213ENST00000483922 TMEM179Q6ZVK1 233 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 C16orf59Q7L2K0 433 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 REPS2Q8NFH8 660 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 TINF2Q9BSI4 451 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 CRNKL1Q9BZJ0 848 aaKnown RBP15.63■□□□□ 0.09
UBR4-213ENST00000483922 VCPKMTQ9H867 229 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 ARMT1Q9H993 441 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 XPNPEP3Q9NQH7 507 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 TACC3Q9Y6A5 838 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 PARP14Q460N5 1801 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 NAV1Q8NEY1 1877 aa15.63■□□□□ 0.09
UBR4-213ENST00000483922 A0A1W2PQ45 241 aaPredicted RBP15.62■□□□□ 0.09
UBR4-213ENST00000483922 A0A1W2PQY0 241 aa15.62■□□□□ 0.09
UBR4-213ENST00000483922 ADAMTS4O75173 837 aa15.62■□□□□ 0.09
UBR4-213ENST00000483922 FCER1AP12319 257 aa15.62■□□□□ 0.09
UBR4-213ENST00000483922 FOSL2P15408 326 aa15.62■□□□□ 0.09
UBR4-213ENST00000483922 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBR4-213ENST00000483922 CLTBP09497 229 aa15.61■□□□□ 0.09
UBR4-213ENST00000483922 CDK8P49336 464 aa15.61■□□□□ 0.09
UBR4-213ENST00000483922 CCSAPQ6IQ19 270 aaPredicted RBP15.61■□□□□ 0.09
UBR4-213ENST00000483922 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
UBR4-213ENST00000483922 RIOX2Q8IUF8 465 aa15.61■□□□□ 0.09
UBR4-213ENST00000483922 RHPN1Q8TCX5 695 aa15.61■□□□□ 0.09
UBR4-213ENST00000483922 ZNF214Q9UL59 606 aaPredicted RBP15.61■□□□□ 0.09
UBR4-213ENST00000483922 REV3LO60673 3130 aa15.61■□□□□ 0.09
UBR4-213ENST00000483922 XIRP2A4UGR9 3374 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 COL11A1P12107 1806 aaPredicted RBP15.6■□□□□ 0.09
UBR4-213ENST00000483922 MYADML2A6NDP7 307 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 GOLIM4O00461 696 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 PQBP1O60828 265 aaKnown RBP15.6■□□□□ 0.09
UBR4-213ENST00000483922 SNAI1O95863 264 aaPredicted RBP15.6■□□□□ 0.09
UBR4-213ENST00000483922 RARBP10826 455 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 EEF2P13639 858 aaKnown RBP15.6■□□□□ 0.09
UBR4-213ENST00000483922 ICA1Q05084 483 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 C12orf60Q5U649 245 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 ITPRIPQ8IWB1 547 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 KLHDC9Q8NEP7 349 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 RNPC3Q96LT9 517 aaKnown RBP15.6■□□□□ 0.09
UBR4-213ENST00000483922 MMP19Q99542 508 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 SWAP70Q9UH65 585 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 RIPK3Q9Y572 518 aa15.6■□□□□ 0.09
UBR4-213ENST00000483922 VWA5AO00534 786 aa15.59■□□□□ 0.09
UBR4-213ENST00000483922 WDR46O15213 610 aaKnown RBP15.59■□□□□ 0.09
UBR4-213ENST00000483922 ADCY6O43306 1168 aa15.59■□□□□ 0.09
UBR4-213ENST00000483922 SLC25A27O95847 323 aa15.59■□□□□ 0.09
UBR4-213ENST00000483922 RAG1P15918 1043 aa15.59■□□□□ 0.09
UBR4-213ENST00000483922 TTF1Q15361 905 aaPredicted RBP15.59■□□□□ 0.09
UBR4-213ENST00000483922 ANKRD33Q7Z3H0 272 aa15.59■□□□□ 0.09
UBR4-213ENST00000483922 SIRT2Q8IXJ6 389 aa15.59■□□□□ 0.09
UBR4-213ENST00000483922 SLC5A4Q9NY91 659 aa15.59■□□□□ 0.09
UBR4-213ENST00000483922 NRBP1Q9UHY1 535 aa15.59■□□□□ 0.09
UBR4-213ENST00000483922 DIS3Q9Y2L1 958 aaKnown RBP15.59■□□□□ 0.09
UBR4-213ENST00000483922 GRXCR1A8MXD5 290 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 USP17L12C9JPN9 530 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 USP17L21D6R901 530 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 CCER2I3L3R5 266 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 DNAJB2P25686 324 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 PBX2P40425 430 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 STAT3P40763 770 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 CDK7P50613 346 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 ACLYP53396 1101 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 FPGSQ05932 587 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 RNF180Q86T96 592 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.58■□□□□ 0.08
UBR4-213ENST00000483922 DNAJC2Q99543 621 aaKnown RBP15.58■□□□□ 0.08
UBR4-213ENST00000483922 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.58■□□□□ 0.088e-10■■□□□ 14.3
UBR4-213ENST00000483922 ARHGEF10LQ9HCE6 1279 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 TMEM39AQ9NV64 488 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 PPP1R9AQ9ULJ8 1098 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 SYNRGQ9UMZ2 1314 aa15.58■□□□□ 0.08
UBR4-213ENST00000483922 CHD7Q9P2D1 2997 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.57■□□□□ 0.08
UBR4-213ENST00000483922 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.57■□□□□ 0.08
UBR4-213ENST00000483922 MBD4O95243 580 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 ADD2P35612 726 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 KCNA10Q16322 511 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 RASIP1Q5U651 963 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 C16orf86Q6ZW13 317 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 PANK1Q8TE04 598 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 FGD4Q96M96 766 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 TOX2Q96NM4 488 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 NUP88Q99567 741 aaPredicted RBP15.57■□□□□ 0.08
UBR4-213ENST00000483922 TSEN34Q9BSV6 310 aaKnown RBP15.57■□□□□ 0.08
UBR4-213ENST00000483922 ZNF576Q9H609 170 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 TBX21Q9UL17 535 aa15.57■□□□□ 0.08
UBR4-213ENST00000483922 DNAJC25-GNG10A0A024R161 153 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 TMEM265A0A087WTH1 108 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 TIMP1P01033 207 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 AKR1A1P14550 325 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 FAM83BQ5T0W9 1011 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 CTR9Q6PD62 1173 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 ERC1Q8IUD2 1116 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 CCDC17Q96LX7 622 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 ATP8A2Q9NTI2 1148 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 ROBO3Q96MS0 1386 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 PLXNA1Q9UIW2 1896 aa15.56■□□□□ 0.08
UBR4-213ENST00000483922 BAZ2AQ9UIF9 1905 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms