RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TIAM1Q13009 1591 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 NBPF26B4DH59 902 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 IL1RL1Q01638 556 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 NBPF15Q8N660 670 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 KRT23Q9C075 422 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 CUTAO60888 179 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 DAB1O75553 588 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 ANKRD44Q8N8A2 993 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 HAUS4Q9H6D7 363 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 MAN1A1P33908 653 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 EHMT1Q9H9B1 1298 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 NOVA2Q9UNW9 492 aaKnown RBP11.23□□□□□ -0.61
COL12A1-207ENST00000483888 SESTD1Q86VW0 696 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 SH3GL1Q99961 368 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 DIAPH2O60879 1101 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 KLHL30Q0D2K2 578 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 RHPN1Q8TCX5 695 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 RUNDC3BQ96NL0 473 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 RPS6KB1P23443 525 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 ADAT2Q7Z6V5 191 aaKnown RBP11.23□□□□□ -0.61
COL12A1-207ENST00000483888 LLPHQ9BRT6 129 aaKnown RBP11.23□□□□□ -0.61
COL12A1-207ENST00000483888 FGFR1OP2Q9NVK5 253 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 LMNB1P20700 586 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 NUDCD1Q96RS6 583 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 CAPN11Q9UMQ6 739 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 LRRIQ3A6PVS8 624 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-207ENST00000483888 SERPINB3P29508 390 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 ADCY8P40145 1251 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 MAD1L1Q9Y6D9 718 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 EPN1Q9Y6I3 576 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-207ENST00000483888 E9PMD0 336 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 DAB2P98082 770 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 TMTC2Q8N394 836 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 POLKQ9UBT6 870 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 MMEP08473 750 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 KCNA3P22001 575 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 ENOX1Q8TC92 643 aaKnown RBP11.22□□□□□ -0.61
COL12A1-207ENST00000483888 PRDM4Q9UKN5 801 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 CHMP2BQ9UQN3 213 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 HEXIM1O94992 359 aaKnown RBP11.22□□□□□ -0.61
COL12A1-207ENST00000483888 CORO7P57737 925 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 NCAPH2Q6IBW4 605 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 CAPN12Q6ZSI9 719 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 TRAIPQ9BWF2 469 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 CD248Q9HCU0 757 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 FANCLQ9NW38 375 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 TRAF3IP3Q9Y228 551 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 BLVRAP53004 296 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 PTPROQ16827 1216 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 TRAF7Q6Q0C0 670 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 ESRRBO95718 433 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 PDE4DQ08499 809 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 KIF22Q14807 665 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 TRMT10CQ7L0Y3 403 aaKnown RBP11.22□□□□□ -0.61
COL12A1-207ENST00000483888 ARHGAP22Q7Z5H3 698 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 KIAA0825Q8IV33 1275 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 TRIM56Q9BRZ2 755 aaKnown RBP11.22□□□□□ -0.61
COL12A1-207ENST00000483888 NLRP14Q86W24 1093 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-207ENST00000483888 ZMYM4Q5VZL5 1548 aa11.22□□□□□ -0.61
COL12A1-207ENST00000483888 CTCFP49711 727 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-207ENST00000483888 RRS1Q15050 365 aaKnown RBP11.21□□□□□ -0.61
COL12A1-207ENST00000483888 DHX32Q7L7V1 743 aaKnown RBP11.21□□□□□ -0.61
COL12A1-207ENST00000483888 NLRP2Q9NX02 1062 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 ADCY3O60266 1144 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 PDE6AP16499 860 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 CABP5Q9NP86 173 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 MEFVO15553 781 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-207ENST00000483888 TMCC1O94876 653 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 CDR2Q01850 454 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 TDRD7Q8NHU6 1098 aaKnown RBP11.21□□□□□ -0.61
COL12A1-207ENST00000483888 MEIS3Q99687 375 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 IMPG2Q9BZV3 1241 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 GOLGA8FQ08AF8 430 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 GOLGA8DPQ0D2H9 430 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 GRK7Q8WTQ7 553 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 MAIP1Q8WWC4 291 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 HNRNPCL2B2RXH8 293 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 KCNJ18B7U540 433 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 POC1B-GALNT4F8VUJ3 575 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 HNRNPCL1O60812 293 aaKnown RBP11.21□□□□□ -0.61
COL12A1-207ENST00000483888 SLC8A3P57103 927 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 NLRP6P59044 892 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 KCNJ12Q14500 433 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 JADE1Q6IE81 842 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 B4GALNT2Q8NHY0 566 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 FAM207AQ9NSI2 230 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-207ENST00000483888 ANGPTL3Q9Y5C1 460 aa11.21□□□□□ -0.61
COL12A1-207ENST00000483888 RPL13P26373 211 aaKnown RBP11.21□□□□□ -0.62
COL12A1-207ENST00000483888 RGS9BPQ6ZS82 235 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 SERPINI1Q99574 410 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 CNNM2Q9H8M5 875 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 WARS2Q9UGM6 360 aaKnown RBP11.21□□□□□ -0.62
COL12A1-207ENST00000483888 RBM5P52756 815 aaKnown RBP eCLIP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms