RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 PLCB3Q01970 1234 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 FAM50AQ14320 339 aaKnown RBP5.41□□□□□ -1.54
LRCH3-217ENST00000483442 NKPD1Q17RQ9 610 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 SPACA3Q8IXA5 215 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 PPP4R2Q9NY27 417 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 BIN2Q9UBW5 565 aaPredicted RBP5.41□□□□□ -1.54
LRCH3-217ENST00000483442 SLIT2O94813 1529 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 SPATA31A3Q5VYP0 1347 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 GLI3P10071 1580 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 RPRD2Q5VT52 1461 aaKnown RBP5.4□□□□□ -1.54
LRCH3-217ENST00000483442 BRWD3Q6RI45 1802 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 TMEM265A0A087WTH1 108 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 EOMESO95936 686 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 MAPK1P28482 360 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 PTPN11Q06124 597 aaPredicted RBP5.4□□□□□ -1.54
LRCH3-217ENST00000483442 ARHGAP27Q6ZUM4 889 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 WAPLQ7Z5K2 1190 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 PRDM10Q9NQV6 1147 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 BTG4Q9NY30 223 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.4□□□□□ -1.54
LRCH3-217ENST00000483442 STK26Q9P289 416 aa5.4□□□□□ -1.54
LRCH3-217ENST00000483442 GNEQ9Y223 722 aaKnown RBP5.4□□□□□ -1.54
LRCH3-217ENST00000483442 GCC2Q8IWJ2 1684 aa5.4□□□□□ -1.55
LRCH3-217ENST00000483442 LRPPRCP42704 1394 aaKnown RBP5.4□□□□□ -1.55
LRCH3-217ENST00000483442 ROBO2Q9HCK4 1378 aa5.4□□□□□ -1.55
LRCH3-217ENST00000483442 ANKRD50Q9ULJ7 1429 aa5.4□□□□□ -1.55
LRCH3-217ENST00000483442 BIN1O00499 593 aa5.39□□□□□ -1.55
LRCH3-217ENST00000483442 CELA3AP09093 270 aa5.39□□□□□ -1.55
LRCH3-217ENST00000483442 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
LRCH3-217ENST00000483442 FAM196AQ6ZSG2 479 aa5.39□□□□□ -1.55
LRCH3-217ENST00000483442 ACSBG1Q96GR2 724 aa5.39□□□□□ -1.55
LRCH3-217ENST00000483442 EMILIN2Q9BXX0 1053 aa5.39□□□□□ -1.55
LRCH3-217ENST00000483442 UNC13BO14795 1591 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 LOC105371045A0A1W2PR82 267 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 PRR33A8MZF0 331 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.38□□□□□ -1.55
LRCH3-217ENST00000483442 CDK8P49336 464 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 MESP2Q0VG99 397 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 INPP5AQ14642 412 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 FYB2Q5VWT5 728 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 SLC23A3Q6PIS1 610 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 FBRSQ9HAH7 460 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 NUP155O75694 1391 aa5.38□□□□□ -1.55
LRCH3-217ENST00000483442 ZNF503-AS2A6NEH8 195 aa5.37□□□□□ -1.55
LRCH3-217ENST00000483442 IGF2BP3O00425 579 aaKnown RBP eCLIP5.37□□□□□ -1.55
LRCH3-217ENST00000483442 MAPK8P45983 427 aa5.37□□□□□ -1.55
LRCH3-217ENST00000483442 ANGEL2Q5VTE6 544 aaKnown RBP5.37□□□□□ -1.55
LRCH3-217ENST00000483442 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.37□□□□□ -1.55
LRCH3-217ENST00000483442 TMEM40Q8WWA1 233 aa5.37□□□□□ -1.55
LRCH3-217ENST00000483442 USP35Q9P2H5 1018 aa5.37□□□□□ -1.55
LRCH3-217ENST00000483442 PCDHA4Q9UN74 947 aa5.37□□□□□ -1.55
LRCH3-217ENST00000483442 SNX11Q9Y5W9 270 aa5.37□□□□□ -1.55
LRCH3-217ENST00000483442 PXDNQ92626 1479 aa5.37□□□□□ -1.55
LRCH3-217ENST00000483442 COL22A1Q8NFW1 1626 aaPredicted RBP5.37□□□□□ -1.55
LRCH3-217ENST00000483442 XRN1Q8IZH2 1706 aaKnown RBP5.37□□□□□ -1.55
LRCH3-217ENST00000483442 SLITRK5O94991 958 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 ZBTB7AO95365 584 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 GSTT1P30711 240 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 ZP2Q05996 745 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 FMR1Q06787 632 aaKnown RBP eCLIP5.36□□□□□ -1.55
LRCH3-217ENST00000483442 IKZF1Q13422 519 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 NKG7Q16617 165 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 LLGL2Q6P1M3 1020 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 LRFN4Q6PJG9 635 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 ARMCX6Q7L4S7 300 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 FLAD1Q8NFF5 587 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 RIN3Q8TB24 985 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 CTNND2Q9UQB3 1225 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 SPATA31A5Q5VU36 1347 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 SPATA31A7Q8IWB4 1347 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 PITPNM2Q9BZ72 1349 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 PTPN23Q9H3S7 1636 aa5.36□□□□□ -1.55
LRCH3-217ENST00000483442 NALCNQ8IZF0 1738 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 LAMC1P11047 1609 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 ADGRL2O95490 1459 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 NINLQ9Y2I6 1382 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 FANCGO15287 622 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 FARP2O94887 1054 aaPredicted RBP5.35□□□□□ -1.55
LRCH3-217ENST00000483442 ITGAEP38570 1179 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 SLBPQ14493 270 aaKnown RBP eCLIP5.35□□□□□ -1.55
LRCH3-217ENST00000483442 PCNX4Q63HM2 1172 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 TMEM132EQ6IEE7 984 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 CILP2Q8IUL8 1156 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 PMFBP1Q8TBY8 1022 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 SYT17Q9BSW7 474 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 PDGFDQ9GZP0 370 aaPredicted RBP5.35□□□□□ -1.55
LRCH3-217ENST00000483442 SEMA3GQ9NS98 782 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 C19orf73Q9NVV2 129 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 GTF2IRD1Q9UHL9 959 aa5.35□□□□□ -1.55
LRCH3-217ENST00000483442 NRXN3Q9Y4C0 1643 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 HFM1A2PYH4 1435 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 DISP2A7MBM2 1401 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 DBX1A6NMT0 343 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 EVA1CP58658 441 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 HNRNPUQ00839 825 aaKnown RBP eCLIP5.34□□□□□ -1.55
LRCH3-217ENST00000483442 SPOCD1Q6ZMY3 1216 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 CYFIP1Q7L576 1253 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 ASB11Q8WXH4 323 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 GAL3ST3Q96A11 431 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 PLPPR2Q96GM1 343 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms