RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 SYNPO2Q9UMS6 1093 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 USP17L10C9JJH3 530 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 DDIT3P35638 169 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 ZNF543Q08ER8 600 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 ZNF280CQ8ND82 737 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 NUP88Q99567 741 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-205ENST00000482968 UBA5Q9GZZ9 404 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 CPVLQ9H3G5 476 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 VCPKMTQ9H867 229 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 ELP3Q9H9T3 547 aa17.46■□□□□ 0.39
PHGDH-205ENST00000482968 TRIM75PA6NK02 468 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 KIF3CO14782 793 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 FMNL1O95466 1100 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-205ENST00000482968 FUT2Q10981 343 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 TTBK2Q6IQ55 1244 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 TRIM22Q8IYM9 498 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 DCAF4Q8WV16 495 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 PIBF1Q8WXW3 757 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-205ENST00000482968 OTOFQ9HC10 1997 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 hCG_1642624A0A1W2PR95 340 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 MTMR2Q13614 643 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 GPATCH4Q5T3I0 446 aaKnown RBP17.45■□□□□ 0.38
PHGDH-205ENST00000482968 LARP1BQ659C4 914 aaKnown RBP17.45■□□□□ 0.38
PHGDH-205ENST00000482968 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 GMCL1Q96IK5 515 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 LZTS2Q9BRK4 669 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 KIAA1683Q9H0B3 1180 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 GBA2Q9HCG7 927 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-205ENST00000482968 VAT1LQ9HCJ6 419 aa17.45■□□□□ 0.38
PHGDH-205ENST00000482968 BMP3P12645 472 aa17.44■□□□□ 0.38
PHGDH-205ENST00000482968 SLC16A2P36021 539 aa17.44■□□□□ 0.38
PHGDH-205ENST00000482968 BACE1P56817 501 aa17.44■□□□□ 0.38
PHGDH-205ENST00000482968 AKAP17AQ02040 695 aaKnown RBP17.44■□□□□ 0.38
PHGDH-205ENST00000482968 DGKZQ13574 1117 aa17.44■□□□□ 0.38
PHGDH-205ENST00000482968 LDLRAD1Q5T700 205 aa17.44■□□□□ 0.38
PHGDH-205ENST00000482968 C2orf69Q8N8R5 385 aa17.44■□□□□ 0.38
PHGDH-205ENST00000482968 AFG3L2Q9Y4W6 797 aa17.44■□□□□ 0.38
PHGDH-205ENST00000482968 PHIPQ8WWQ0 1821 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 CYTH3O43739 400 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 SYT1P21579 422 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 FOSBP53539 338 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 PKP1Q13835 747 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 CST9Q5W186 159 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 AIFM3Q96NN9 605 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 RNF26Q9BY78 433 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-205ENST00000482968 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 CNTNAP5Q8WYK1 1306 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 PAPPA2Q9BXP8 1791 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 TMEM232C9JQI7 657 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
PHGDH-205ENST00000482968 YY1P25490 414 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 FAM83BQ5T0W9 1011 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 ERO1BQ86YB8 467 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 SLC10A4Q96EP9 437 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 OTUD5Q96G74 571 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 EMILIN3Q9NT22 766 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 CHMP5Q9NZZ3 219 aa17.43■□□□□ 0.38
PHGDH-205ENST00000482968 MYH6P13533 1939 aa17.42■□□□□ 0.38
PHGDH-205ENST00000482968 DEXIO95424 95 aa17.42■□□□□ 0.38
PHGDH-205ENST00000482968 PDCP20941 246 aa17.42■□□□□ 0.38
PHGDH-205ENST00000482968 USP14P54578 494 aa17.42■□□□□ 0.38
PHGDH-205ENST00000482968 FKBP1BP68106 108 aa17.42■□□□□ 0.38
PHGDH-205ENST00000482968 IKQ13123 557 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-205ENST00000482968 ALG1Q9BT22 464 aa17.42■□□□□ 0.38
PHGDH-205ENST00000482968 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
PHGDH-205ENST00000482968 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
PHGDH-205ENST00000482968 C19orf81C9J6K1 198 aa17.41■□□□□ 0.38
PHGDH-205ENST00000482968 SMARCA1P28370 1054 aa17.41■□□□□ 0.38
PHGDH-205ENST00000482968 HMGCS2P54868 508 aa17.41■□□□□ 0.38
PHGDH-205ENST00000482968 PPATQ06203 517 aa17.41■□□□□ 0.38
PHGDH-205ENST00000482968 ADGRF4Q8IZF3 695 aa17.41■□□□□ 0.38
PHGDH-205ENST00000482968 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
PHGDH-205ENST00000482968 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-205ENST00000482968 SPDYE5A6NIY4 337 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 IRF6O14896 467 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 STX6O43752 255 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 PKN1Q16512 942 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 FOXD4L5Q5VV16 416 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-205ENST00000482968 HOMER1Q86YM7 354 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 FOXD4L4Q8WXT5 416 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-205ENST00000482968 WASF1Q92558 559 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 LPAR1Q92633 364 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 OPTNQ96CV9 577 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 GJB4Q9NTQ9 266 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 TRPM7Q96QT4 1865 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 VPS37CA5D8V6 355 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-205ENST00000482968 H3BQV1 296 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 NUCB2P80303 420 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 GUCY1B3Q02153 619 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 IFFO2Q5TF58 517 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 OTUD7BQ6GQQ9 843 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 SMC1BQ8NDV3 1235 aa17.4■□□□□ 0.38
PHGDH-205ENST00000482968 RBM46Q8TBY0 533 aaKnown RBP17.4■□□□□ 0.38
PHGDH-205ENST00000482968 RRP36Q96EU6 259 aaKnown RBP17.4■□□□□ 0.38
PHGDH-205ENST00000482968 C8orf76Q96K31 380 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms