RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 SOCS4Q8WXH5 440 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 SHISA4Q96DD7 197 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 CCDC17Q96LX7 622 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 NUDT12Q9BQG2 462 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 PAGR1Q9BTK6 254 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 UNC93B1Q9H1C4 597 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 RABGAP1Q9Y3P9 1069 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 TTC41PQ6P2S7 1318 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 MYH8P13535 1937 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L12C9JPN9 530 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L21D6R901 530 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 SGPL1O95470 568 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 HMGCRP04035 888 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 CHGBP05060 677 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 CCNA1P78396 465 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 Q3C1V9 767 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
COL21A1-209ENST00000482933 BAZ2AQ9UIF9 1905 aaKnown RBP15.35■□□□□ 0.05
COL21A1-209ENST00000482933 CDK8P49336 464 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 LBX2Q6XYB7 198 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 C16orf86Q6ZW13 317 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 APPBP2Q92624 585 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 STRBPQ96SI9 672 aaKnown RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 ADAM33Q9BZ11 813 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 RPAP3Q9H6T3 665 aaPredicted RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 SH2D4AQ9H788 454 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 ARHGEF10LQ9HCE6 1279 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 CWC22Q9HCG8 908 aaKnown RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 RNF113AO15541 343 aaKnown RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 GLRX3O76003 335 aaKnown RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 XRCC5P13010 732 aaKnown RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 CYP2B6P20813 491 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 TSHZ3Q63HK5 1081 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 GIMAP6Q6P9H5 292 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 CTR9Q6PD62 1173 aa15.34■□□□□ 0.05
COL21A1-209ENST00000482933 TRMT44Q8IYL2 757 aaKnown RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 PAK6Q9NQU5 681 aaPredicted RBP15.34■□□□□ 0.05
COL21A1-209ENST00000482933 A0A1W2PRG0 241 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 PEX10O60683 326 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 AKR1B1P15121 316 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 GNAT2P19087 354 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 ICA1Q05084 483 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 GPR142Q7Z601 462 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 PLEKHH3Q7Z736 793 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 LPAR1Q92633 364 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 DEFB118Q96PH6 123 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 CRBNQ96SW2 442 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 HTATIP2Q9BUP3 242 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 PORCNQ9H237 461 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 HMX1Q9NP08 348 aaPredicted RBP15.33■□□□□ 0.04
COL21A1-209ENST00000482933 HOXC10Q9NYD6 342 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 RPTORQ8N122 1335 aa15.33■□□□□ 0.04
COL21A1-209ENST00000482933 CYP2D7A0A087X1C5 515 aa15.32■□□□□ 0.04
COL21A1-209ENST00000482933 CNMDO75829 334 aa15.32■□□□□ 0.04
COL21A1-209ENST00000482933 TFRCP02786 760 aaKnown RBP15.32■□□□□ 0.04
COL21A1-209ENST00000482933 RGS2P41220 211 aa15.32■□□□□ 0.04
COL21A1-209ENST00000482933 COG2Q14746 738 aa15.32■□□□□ 0.04
COL21A1-209ENST00000482933 SBK1Q52WX2 424 aa15.32■□□□□ 0.04
COL21A1-209ENST00000482933 OSBP2Q969R2 916 aa15.32■□□□□ 0.04
COL21A1-209ENST00000482933 ZBED2Q9BTP6 218 aa15.32■□□□□ 0.04
COL21A1-209ENST00000482933 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.04
COL21A1-209ENST00000482933 TMX2Q9Y320 296 aa15.32■□□□□ 0.04
COL21A1-209ENST00000482933 PLXNB2O15031 1838 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 SPDYE16A6NNV3 312 aaPredicted RBP15.31■□□□□ 0.04
COL21A1-209ENST00000482933 GPAA1O43292 621 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 FARP2O94887 1054 aaPredicted RBP15.31■□□□□ 0.04
COL21A1-209ENST00000482933 MX1P20591 662 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 AAMPQ13685 434 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 MORN1Q5T089 497 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 TYW1BQ6NUM6 668 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 TRIB2Q92519 343 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 DPF3Q92784 378 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 TANGO6Q9C0B7 1094 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 VCPKMTQ9H867 229 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 KANSL2Q9H9L4 492 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 PCDHGA10Q9Y5H3 936 aa15.31■□□□□ 0.04
COL21A1-209ENST00000482933 GSG1L2A8MUP6 293 aa15.3■□□□□ 0.04
COL21A1-209ENST00000482933 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
COL21A1-209ENST00000482933 WDR78Q5VTH9 848 aa15.3■□□□□ 0.04
COL21A1-209ENST00000482933 PI4K2BQ8TCG2 481 aa15.3■□□□□ 0.04
COL21A1-209ENST00000482933 USP6NLQ92738 828 aa15.3■□□□□ 0.04
COL21A1-209ENST00000482933 APBA2Q99767 749 aa15.3■□□□□ 0.04
COL21A1-209ENST00000482933 FSD1Q9BTV5 496 aa15.3■□□□□ 0.04
COL21A1-209ENST00000482933 IVNS1ABPQ9Y6Y0 642 aa15.3■□□□□ 0.04
COL21A1-209ENST00000482933 SMIM22K7EJ46 135 aa15.29■□□□□ 0.04
COL21A1-209ENST00000482933 WDR46O15213 610 aaKnown RBP15.29■□□□□ 0.04
COL21A1-209ENST00000482933 APPP05067 770 aa15.29■□□□□ 0.04
COL21A1-209ENST00000482933 MAP2K5Q13163 448 aa15.29■□□□□ 0.04
COL21A1-209ENST00000482933 ANKRD45Q5TZF3 282 aa15.29■□□□□ 0.04
COL21A1-209ENST00000482933 MB21D1Q8N884 522 aa15.29■□□□□ 0.04
COL21A1-209ENST00000482933 MKNK2Q9HBH9 465 aa15.29■□□□□ 0.04
COL21A1-209ENST00000482933 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
COL21A1-209ENST00000482933 BTBD7Q9P203 1132 aa15.29■□□□□ 0.04
COL21A1-209ENST00000482933 SLC15A5A6NIM6 579 aa15.28■□□□□ 0.04
COL21A1-209ENST00000482933 MINDY4BA8MYZ0 360 aa15.28■□□□□ 0.04
COL21A1-209ENST00000482933 PPP1R3GB7ZBB8 358 aa15.28■□□□□ 0.04
COL21A1-209ENST00000482933 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 581 ms