RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 VPS18Q9P253 973 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 LRP5O75197 1615 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 TRIM75PA6NK02 468 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 N4BP1O75113 896 aaKnown RBP17.25■□□□□ 0.35
DDR1-244ENST00000482873 KRT2P35908 639 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 FUT2Q10981 343 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 NR1I3Q14994 352 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
DDR1-244ENST00000482873 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
DDR1-244ENST00000482873 RAD9BQ6WBX8 426 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 SRLQ86TD4 932 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 ENOX1Q8TC92 643 aaKnown RBP17.25■□□□□ 0.35
DDR1-244ENST00000482873 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
DDR1-244ENST00000482873 CWC15Q9P013 229 aaKnown RBP17.25■□□□□ 0.35
DDR1-244ENST00000482873 RSPH14Q9UHP6 348 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
DDR1-244ENST00000482873 BCL9LQ86UU0 1499 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 ECM29Q5VYK3 1845 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 TSPY2A6NKD2 308 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 MCM7P33993 719 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 RNF26Q9BY78 433 aaPredicted RBP17.24■□□□□ 0.35
DDR1-244ENST00000482873 CPVLQ9H3G5 476 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 YY1AP1Q9H869 796 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 SRPRBQ9Y5M8 271 aaKnown RBP17.24■□□□□ 0.35
DDR1-244ENST00000482873 TEX33O43247 280 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 ACTN4O43707 911 aaKnown RBP17.24■□□□□ 0.35
DDR1-244ENST00000482873 ZPR1O75312 459 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 WWC2Q6AWC2 1192 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 SLC44A5Q8NCS7 719 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 HNRNPLLQ8WVV9 542 aaKnown RBP17.24■□□□□ 0.35
DDR1-244ENST00000482873 ANKIB1Q9P2G1 1089 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 THRAP3Q9Y2W1 955 aaKnown RBP17.24■□□□□ 0.35
DDR1-244ENST00000482873 ADGRG1Q9Y653 693 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
DDR1-244ENST00000482873 MAPK8IP1Q9UQF2 711 aa17.24■□□□□ 0.35
DDR1-244ENST00000482873 SARSP49591 514 aaKnown RBP17.23■□□□□ 0.35
DDR1-244ENST00000482873 PTGDRQ13258 359 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 NT5DC1Q5TFE4 455 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 FBXO33Q7Z6M2 555 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 MLKLQ8NB16 471 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 CDC23Q9UJX2 597 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 RRP15Q9Y3B9 282 aaKnown RBP17.23■□□□□ 0.35
DDR1-244ENST00000482873 CHD4Q14839 1912 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 AKR1B15C9JRZ8 316 aaPredicted RBP17.23■□□□□ 0.35
DDR1-244ENST00000482873 CLGNO14967 610 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 CD44P16070 742 aaKnown RBP17.23■□□□□ 0.35
DDR1-244ENST00000482873 XBP1P17861 261 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 PSEN1P49768 467 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 NLRP5P59047 1200 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 MORC3Q14149 939 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 PLIN2Q99541 437 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 ABCB6Q9NP58 842 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 RAB21Q9UL25 225 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 L1RE1Q9UN81 338 aa17.23■□□□□ 0.35
DDR1-244ENST00000482873 LTBP4Q8N2S1 1624 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 A0A1B0GTH6 734 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 USP17L3A6NCW0 530 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 USP17L4A6NCW7 530 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 USP5P45974 858 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 NFIXQ14938 502 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 USP17L1Q7RTZ2 530 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 DZIP1Q86YF9 867 aaKnown RBP17.22■□□□□ 0.35
DDR1-244ENST00000482873 STAG2Q8N3U4 1231 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 IQUBQ8NA54 791 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
DDR1-244ENST00000482873 SAP30BPQ9UHR5 308 aaKnown RBP17.22■□□□□ 0.35
DDR1-244ENST00000482873 ANAPC4Q9UJX5 808 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 RBL2Q08999 1139 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 HDXQ7Z353 690 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 MSANTD4Q8NCY6 345 aa17.22■□□□□ 0.35
DDR1-244ENST00000482873 TNNT3P45378 269 aaPredicted RBP17.21■□□□□ 0.35
DDR1-244ENST00000482873 NPY5RQ15761 445 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 FOXR1Q6PIV2 292 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 TMTC3Q6ZXV5 915 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 APTXQ7Z2E3 356 aaKnown RBP17.21■□□□□ 0.35
DDR1-244ENST00000482873 ELOA2Q8IYF1 753 aaPredicted RBP17.21■□□□□ 0.35
DDR1-244ENST00000482873 PANX2Q96RD6 677 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 HOOK1Q9UJC3 728 aaKnown RBP17.21■□□□□ 0.35
DDR1-244ENST00000482873 FAN1Q9Y2M0 1017 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 PRPF3O43395 683 aaKnown RBP17.21■□□□□ 0.35
DDR1-244ENST00000482873 ABL1P00519 1130 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 TFAP4Q01664 338 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 ZNF569Q5MCW4 686 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 CEP112Q8N8E3 955 aa17.21■□□□□ 0.35
DDR1-244ENST00000482873 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
DDR1-244ENST00000482873 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.35
DDR1-244ENST00000482873 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
DDR1-244ENST00000482873 KIF5CO60282 957 aa17.2■□□□□ 0.34
DDR1-244ENST00000482873 RHOXF2BP0C7M4 288 aa17.2■□□□□ 0.34
DDR1-244ENST00000482873 TTC38Q5R3I4 469 aa17.2■□□□□ 0.34
DDR1-244ENST00000482873 PAGE5Q96GU1 130 aa17.2■□□□□ 0.34
DDR1-244ENST00000482873 RHOXF2Q9BQY4 288 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms