RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ZNF70Q9UC06 446 aaPredicted RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 PLIN4Q96Q06 1357 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 SBF1O95248 1867 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 TCP10L2B9ZVM9 353 aa18.08■□□□□ 0.48
RXRA-202ENST00000481739 MYO1BO43795 1136 aa18.08■□□□□ 0.48
RXRA-202ENST00000481739 MARCKSP29966 332 aaPredicted RBP18.08■□□□□ 0.48
RXRA-202ENST00000481739 TRAPPC10P48553 1259 aa18.08■□□□□ 0.48
RXRA-202ENST00000481739 VEZTQ9HBM0 779 aa18.08■□□□□ 0.48
RXRA-202ENST00000481739 RRAGDQ9NQL2 400 aaPredicted RBP18.08■□□□□ 0.48
RXRA-202ENST00000481739 VPS54Q9P1Q0 977 aa18.08■□□□□ 0.48
RXRA-202ENST00000481739 PTMAP06454 111 aaKnown RBP18.07■□□□□ 0.48
RXRA-202ENST00000481739 PTPREP23469 700 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 SYKP43405 635 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 GPR162Q16538 588 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 MICALL2Q8IY33 904 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 CEP57L1Q8IYX8 460 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 MTMR14Q8NCE2 650 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 DHX36Q9H2U1 1008 aaKnown RBP18.07■□□□□ 0.48
RXRA-202ENST00000481739 RNF181Q9P0P0 153 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 KIAA1468Q9P260 1216 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 SERPINB13Q9UIV8 391 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 UTRNP46939 3433 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 TRIM75PA6NK02 468 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 ENTPD3O75355 529 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 TPM3P06753 285 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 NOVP48745 357 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 MMP14P50281 582 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 TOB1P50616 345 aaPredicted RBP18.07■□□□□ 0.48
RXRA-202ENST00000481739 DPF2Q92785 391 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 TRIM34Q9BYJ4 488 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 SWAP70Q9UH65 585 aa18.07■□□□□ 0.48
RXRA-202ENST00000481739 CNOT7Q9UIV1 285 aaKnown RBP18.07■□□□□ 0.48
RXRA-202ENST00000481739 NPM3O75607 178 aaKnown RBP18.06■□□□□ 0.48
RXRA-202ENST00000481739 SMARCA1P28370 1054 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 NR5A1Q13285 461 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 SPDYE2Q495Y8 402 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 GALNT17Q6IS24 598 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 SHC4Q6S5L8 630 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 DNAJC25Q9H1X3 360 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 FAM13BQ9NYF5 915 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 HOOK1Q9UJC3 728 aaKnown RBP18.06■□□□□ 0.48
RXRA-202ENST00000481739 ZKSCAN5Q9Y2L8 839 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 MYH8P13535 1937 aa18.06■□□□□ 0.48
RXRA-202ENST00000481739 DDTLA6NHG4 134 aaPredicted RBP18.05■□□□□ 0.48
RXRA-202ENST00000481739 GOLGA6L6A8MZA4 724 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 ZNF280AP59817 542 aaPredicted RBP18.05■□□□□ 0.48
RXRA-202ENST00000481739 NBPF9Q3BBW0 867 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 CCDC148Q8NFR7 591 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 SRPRBQ9Y5M8 271 aaKnown RBP18.05■□□□□ 0.48
RXRA-202ENST00000481739 GOLGA6L19H0YKK7 550 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 WNT10BO00744 389 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 TOP1P11387 765 aaKnown RBP18.05■□□□□ 0.48
RXRA-202ENST00000481739 TBC1D10BQ4KMP7 808 aaPredicted RBP18.05■□□□□ 0.48
RXRA-202ENST00000481739 LUZP1Q86V48 1076 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 CCDC34Q96HJ3 373 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 TMEM47Q9BQJ4 181 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 CABP5Q9NP86 173 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 PI4KBQ9UBF8 816 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 STX8Q9UNK0 236 aa18.05■□□□□ 0.48
RXRA-202ENST00000481739 PALM3A6NDB9 673 aaPredicted RBP18.04■□□□□ 0.48
RXRA-202ENST00000481739 H7C1D1 291 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 NLRP5P59047 1200 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 GABPAQ06546 454 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 SH3BP5LQ7L8J4 393 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 SAMD7Q7Z3H4 446 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.04■□□□□ 0.48
RXRA-202ENST00000481739 GPC2Q8N158 579 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 OXER1Q8TDS5 423 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 TNFRSF25Q93038 417 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 FERMT2Q96AC1 680 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 BPIFA3Q9BQP9 254 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 SPZ1Q9BXG8 430 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 RTN4Q9NQC3 1192 aaKnown RBP18.04■□□□□ 0.48
RXRA-202ENST00000481739 MAD2L2Q9UI95 211 aa18.04■□□□□ 0.48
RXRA-202ENST00000481739 FBXO2Q9UK22 296 aaPredicted RBP18.04■□□□□ 0.48
RXRA-202ENST00000481739 C9orf131Q5VYM1 1079 aa18.03■□□□□ 0.48
RXRA-202ENST00000481739 ZBED3Q96IU2 234 aaPredicted RBP18.03■□□□□ 0.48
RXRA-202ENST00000481739 EHD4Q9H223 541 aa18.03■□□□□ 0.48
RXRA-202ENST00000481739 KCNH3Q9ULD8 1083 aa18.03■□□□□ 0.48
RXRA-202ENST00000481739 EGFRP00533 1210 aa18.02■□□□□ 0.48
RXRA-202ENST00000481739 IQCB1Q15051 598 aa18.02■□□□□ 0.48
RXRA-202ENST00000481739 NPY5RQ15761 445 aa18.02■□□□□ 0.48
RXRA-202ENST00000481739 SARM1Q6SZW1 724 aa18.02■□□□□ 0.48
RXRA-202ENST00000481739 FAM151AQ8WW52 585 aa18.02■□□□□ 0.48
RXRA-202ENST00000481739 SHISA4Q96DD7 197 aa18.02■□□□□ 0.48
RXRA-202ENST00000481739 PCDHB6Q9Y5E3 794 aa18.02■□□□□ 0.48
RXRA-202ENST00000481739 FAM196BA6NMK8 535 aa18.02■□□□□ 0.47
RXRA-202ENST00000481739 BECN2A8MW95 431 aa18.02■□□□□ 0.47
RXRA-202ENST00000481739 KANK3Q6NY19 840 aa18.02■□□□□ 0.47
RXRA-202ENST00000481739 FOXP4Q8IVH2 680 aaPredicted RBP18.02■□□□□ 0.47
RXRA-202ENST00000481739 DAGLBQ8NCG7 672 aa18.02■□□□□ 0.47
RXRA-202ENST00000481739 CCDC12Q8WUD4 166 aaPredicted RBP18.02■□□□□ 0.47
RXRA-202ENST00000481739 CSRNP1Q96S65 589 aa18.02■□□□□ 0.47
RXRA-202ENST00000481739 TUBE1Q9UJT0 475 aa18.02■□□□□ 0.47
RXRA-202ENST00000481739 hCG_1984214I3L0E3 225 aa18.01■□□□□ 0.47
RXRA-202ENST00000481739 SLURP2P0DP57 97 aa18.01■□□□□ 0.47
RXRA-202ENST00000481739 SHMT1P34896 483 aa18.01■□□□□ 0.47
RXRA-202ENST00000481739 PLCB2Q00722 1185 aa18.01■□□□□ 0.47
RXRA-202ENST00000481739 KIF4BQ2VIQ3 1234 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms