RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 TJP2Q9UDY2 1190 aa6.06□□□□□ -1.44
COPA-204ENST00000481522 TMEM59LQ9UK28 342 aa6.06□□□□□ -1.44
COPA-204ENST00000481522 CAPN6Q9Y6Q1 641 aa6.06□□□□□ -1.44
COPA-204ENST00000481522 SCAMP3O14828 347 aaKnown RBP6.05□□□□□ -1.44
COPA-204ENST00000481522 TLR3O15455 904 aaKnown RBP6.05□□□□□ -1.44
COPA-204ENST00000481522 GRIN3BO60391 1043 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 CST3P01034 146 aaPredicted RBP6.05□□□□□ -1.44
COPA-204ENST00000481522 TGM1P22735 817 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 YARSP54577 528 aaKnown RBP6.05□□□□□ -1.44
COPA-204ENST00000481522 ERVFC1P60507 584 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 RALGPS1Q5JS13 557 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 SLC6A19Q695T7 634 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 USP48Q86UV5 1035 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 FAM13CQ8NE31 585 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 ZNF296Q8WUU4 475 aaPredicted RBP6.05□□□□□ -1.44
COPA-204ENST00000481522 RNF34Q969K3 372 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 UBE2FQ969M7 185 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 KCNQ5Q9NR82 932 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 CORINQ9Y5Q5 1042 aa6.05□□□□□ -1.44
COPA-204ENST00000481522 DNAJC25-GNG10A0A024R161 153 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 HPXP02790 462 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 GARTP22102 1010 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 HMGA2P52926 109 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 APOBRQ0VD83 1088 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 MLECQ14165 292 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 LDLRAD1Q5T700 205 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 LETMD1Q6P1Q0 360 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 KIAA0825Q8IV33 1275 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 MCATQ8IVS2 390 aaKnown RBP6.04□□□□□ -1.44
COPA-204ENST00000481522 FBXO27Q8NI29 283 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 ACSF2Q96CM8 615 aaPredicted RBP6.04□□□□□ -1.44
COPA-204ENST00000481522 LRRC3Q9BY71 257 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 ZSWIM5Q9P217 1185 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 KLHL3Q9UH77 587 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 ROBO2Q9HCK4 1378 aa6.04□□□□□ -1.44
COPA-204ENST00000481522 E9PSI1 815 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 HTR3BO95264 441 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 CYP7A1P22680 504 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 HK2P52789 917 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 DLG4P78352 724 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 HHIPL2Q6UWX4 724 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 FEZF2Q8TBJ5 459 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 GPR20Q99678 358 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 SPON2Q9BUD6 331 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 REV1Q9UBZ9 1251 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 ADAMTS1Q9UHI8 967 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 PCDHGB7Q9Y5F8 929 aa6.03□□□□□ -1.44
COPA-204ENST00000481522 MATN3O15232 486 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 SEMA7AO75326 666 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 SASH1O94885 1247 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 ETV3P41162 512 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 HNRNPA0Q13151 305 aaKnown RBP6.02□□□□□ -1.45
COPA-204ENST00000481522 ZNF394Q53GI3 561 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 TMEM201Q5SNT2 666 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 TMPRSS7Q7RTY8 843 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 CYB5D2Q8WUJ1 264 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 COX4I2Q96KJ9 171 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 MCOLN1Q9GZU1 580 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 UBP1Q9NZI7 540 aa6.02□□□□□ -1.45
COPA-204ENST00000481522 POLR3KQ9Y2Y1 108 aaPredicted RBP6.02□□□□□ -1.45
COPA-204ENST00000481522 PRR36Q9H6K5 1346 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 GREM1O60565 184 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 CBX7O95931 251 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 MCM4P33991 863 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 CRKP46108 304 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 CHMP4BP1P59074 171 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 SEZ6Q53EL9 994 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 CRB2Q5IJ48 1285 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 IRF2BP1Q8IU81 584 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 PHACTR4Q8IZ21 702 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 TEPSINQ96N21 525 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 RNF32Q9H0A6 362 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 BRMS1Q9HCU9 246 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 CNOT6Q9ULM6 557 aaKnown RBP6.01□□□□□ -1.45
COPA-204ENST00000481522 PCDHB14Q9Y5E9 798 aa6.01□□□□□ -1.45
COPA-204ENST00000481522 FSHBP01225 129 aa6□□□□□ -1.45
COPA-204ENST00000481522 ESR1P03372 595 aa6□□□□□ -1.45
COPA-204ENST00000481522 TNNI2P48788 182 aa6□□□□□ -1.45
COPA-204ENST00000481522 ZNF385BQ569K4 471 aa6□□□□□ -1.45
COPA-204ENST00000481522 SLFN12Q8IYM2 578 aa6□□□□□ -1.45
COPA-204ENST00000481522 NKD1Q969G9 470 aa6□□□□□ -1.45
COPA-204ENST00000481522 NT5C1AQ9BXI3 368 aa6□□□□□ -1.45
COPA-204ENST00000481522 SLC6A17Q9H1V8 727 aa6□□□□□ -1.45
COPA-204ENST00000481522 ADAMTS10Q9H324 1103 aa6□□□□□ -1.45
COPA-204ENST00000481522 SLITRK6Q9H5Y7 841 aa6□□□□□ -1.45
COPA-204ENST00000481522 MED1Q15648 1581 aaPredicted RBP6□□□□□ -1.45
COPA-204ENST00000481522 UPK3BL1B0FP48 263 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 UPK3BL2E5RIL1 263 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 PEX10O60683 326 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 TRHRP34981 398 aaPredicted RBP5.99□□□□□ -1.45
COPA-204ENST00000481522 KIR3DL1P43629 444 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 ZNF165P49910 485 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 GK5Q6ZS86 529 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 ZNF605Q86T29 641 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 CDH24Q86UP0 819 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 TMEM151BQ8IW70 566 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 ZNF654Q8IZM8 581 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 RIN3Q8TB24 985 aa5.99□□□□□ -1.45
COPA-204ENST00000481522 SCAND2PQ9GZW5 306 aaPredicted RBP5.99□□□□□ -1.45
COPA-204ENST00000481522 GMIPQ9P107 970 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms