RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 TLDC2A0PJX2 215 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ASIC2Q16515 512 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 STXBP4Q6ZWJ1 553 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 TADA2BQ86TJ2 420 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 CERS3Q8IU89 383 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ERMNQ8TAM6 284 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 UTP11Q9Y3A2 253 aaKnown RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ARHGEF28Q8N1W1 1705 aaKnown RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ZMYND10O75800 440 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 PARP1P09874 1014 aaKnown RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 PTGDRQ13258 359 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 RETREG2Q8NC44 543 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ANKIB1Q9P2G1 1089 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 IL2RBP14784 551 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 GUCY2FP51841 1108 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ZNF658Q5TYW1 1059 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 SFMBT2Q5VUG0 894 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 TTLL7Q6ZT98 887 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 CABP7Q86V35 215 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 HOOK3Q86VS8 718 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 CTNNBL1Q8WYA6 563 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 PAGE5Q96GU1 130 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 RNF26Q9BY78 433 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 PRDM1O75626 825 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ADD2P35612 726 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 SSR1P43307 286 aaKnown RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 PLA2G4AP47712 749 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 CEP85LQ5SZL2 805 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 MMS22LQ6ZRQ5 1243 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 IL17RAQ96F46 866 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 ZSCAN10Q96SZ4 725 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 NAP1L3Q99457 506 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
DDX39B-219ENST00000481456 PPANQ9NQ55 473 aaKnown RBP12.81□□□□□ -0.36
DDX39B-219ENST00000481456 PTPREP23469 700 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 MB21D2Q8IYB1 491 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-219ENST00000481456 FNBP4Q8N3X1 1017 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-219ENST00000481456 PCDHB6Q9Y5E3 794 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 TNKSO95271 1327 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 SMIM23A6NLE4 172 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 KIF28PB7ZC32 967 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 CCNT1O60563 726 aaKnown RBP12.8□□□□□ -0.36
DDX39B-219ENST00000481456 COBLO75128 1261 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 RPS6KA1Q15418 735 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 TTC19Q6DKK2 380 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-219ENST00000481456 MCTP2Q6DN12 878 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 SHC4Q6S5L8 630 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 CD163L1Q9NR16 1453 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 BUB1BO60566 1050 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-219ENST00000481456 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 C2orf54Q08AI8 447 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 PIK3C2BO00750 1634 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 LIFRP42702 1097 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 KRT31Q15323 416 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 ABHD10Q9NUJ1 306 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.367e-11■■■■□ 20.8
DDX39B-219ENST00000481456 DENND2AQ9ULE3 1009 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 FAM184BQ9ULE4 1060 aa12.8□□□□□ -0.36
DDX39B-219ENST00000481456 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 ZNF609O15014 1411 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 ANKRD62A6NC57 917 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 CEP104O60308 925 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 NR5A1Q13285 461 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 CCDC170Q8IYT3 715 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 PALLDQ8WX93 1383 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 STK36Q9NRP7 1315 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 ALS2CLQ60I27 953 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 CCDC65Q8IXS2 484 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 DDX12PQ92771 950 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 TUBGCP2Q9BSJ2 902 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 FEZ2Q9UHY8 353 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-219ENST00000481456 TUBE1Q9UJT0 475 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 B4DLN1 442 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 VIMP08670 466 aaKnown RBP12.79□□□□□ -0.36
DDX39B-219ENST00000481456 CTNNA1P35221 906 aaKnown RBP12.79□□□□□ -0.36
DDX39B-219ENST00000481456 TRAPPC10P48553 1259 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 LACTBP83111 547 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-219ENST00000481456 CROCCP2Q86T23 111 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 PCCAP05165 728 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-219ENST00000481456 TCP11X2Q5H9J9 407 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 KRT25Q7Z3Z0 450 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 CACNA2D3Q8IZS8 1091 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 IFT74Q96LB3 600 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 SAMM50Q9Y512 469 aa12.79□□□□□ -0.36
DDX39B-219ENST00000481456 CCDC77Q9BR77 488 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 TAF6LQ9Y6J9 622 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 CTSWP56202 376 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 KLHL30Q0D2K2 578 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
DDX39B-219ENST00000481456 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 PLCB1Q9NQ66 1216 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 DDAH1O94760 285 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms