RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 TAL1P17542 331 aaPredicted RBP21.04■□□□□ 0.96
RXRB-203ENST00000481441 FAAP100Q0VG06 881 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 CLEC10AQ8IUN9 316 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 SPICE1Q8N0Z3 855 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 TINF2Q9BSI4 451 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 TMEM39AQ9NV64 488 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 ADAMTS5Q9UNA0 930 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 TNFRSF10AO00220 468 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 PGK2P07205 417 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 CYP2D6P10635 497 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 ZNF792Q3KQV3 632 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 ANKRD33Q7Z3H0 272 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 TOX2Q96NM4 488 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 MMP19Q99542 508 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 ZNF576Q9H609 170 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 VCPKMTQ9H867 229 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 ARHGEF10LQ9HCE6 1279 aa21.03■□□□□ 0.96
RXRB-203ENST00000481441 DCP1AQ9NPI6 582 aaPredicted RBP21.03■□□□□ 0.96
RXRB-203ENST00000481441 DIS3Q9Y2L1 958 aaKnown RBP21.03■□□□□ 0.96
RXRB-203ENST00000481441 MUC3AQ02505 3323 aa21.02■□□□□ 0.96
RXRB-203ENST00000481441 MYO9BQ13459 2157 aa21.02■□□□□ 0.96
RXRB-203ENST00000481441 ADAMTS4O75173 837 aa21.02■□□□□ 0.95
RXRB-203ENST00000481441 ZNF865P0CJ78 1059 aaPredicted RBP21.02■□□□□ 0.95
RXRB-203ENST00000481441 PDE6AP16499 860 aa21.02■□□□□ 0.95
RXRB-203ENST00000481441 SDR42E1Q8WUS8 393 aa21.02■□□□□ 0.95
RXRB-203ENST00000481441 LENG1Q96BZ8 264 aaPredicted RBP21.02■□□□□ 0.95
RXRB-203ENST00000481441 SWAP70Q9UH65 585 aa21.02■□□□□ 0.95
RXRB-203ENST00000481441 WDR46O15213 610 aaKnown RBP21.01■□□□□ 0.95
RXRB-203ENST00000481441 AKR1A1P14550 325 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 AKR1B1P15121 316 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 COL9A1P20849 921 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 ICA1Q05084 483 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 SLC9C2Q5TAH2 1124 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 ZKSCAN2Q63HK3 967 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 SAMD1Q6SPF0 538 aaPredicted RBP21.01■□□□□ 0.95
RXRB-203ENST00000481441 RIOX2Q8IUF8 465 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 DYNLL2Q96FJ2 89 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 TSEN34Q9BSV6 310 aaKnown RBP21.01■□□□□ 0.95
RXRB-203ENST00000481441 SH2D4AQ9H788 454 aa21.01■□□□□ 0.95
RXRB-203ENST00000481441 BAZ2AQ9UIF9 1905 aaKnown RBP21■□□□□ 0.95
RXRB-203ENST00000481441 DCDC2CA8MYV0 355 aa21■□□□□ 0.95
RXRB-203ENST00000481441 ACLYP53396 1101 aa21■□□□□ 0.95
RXRB-203ENST00000481441 KCTD2Q14681 263 aa21■□□□□ 0.95
RXRB-203ENST00000481441 TTF1Q15361 905 aaPredicted RBP21■□□□□ 0.95
RXRB-203ENST00000481441 AACSQ86V21 672 aa21■□□□□ 0.95
RXRB-203ENST00000481441 TIFAQ96CG3 184 aa21■□□□□ 0.95
RXRB-203ENST00000481441 BUD13Q9BRD0 619 aaKnown RBP eCLIP21■□□□□ 0.951e-13■■□□□ 12
RXRB-203ENST00000481441 ZNF532Q9HCE3 1301 aa20.99■□□□□ 0.95
RXRB-203ENST00000481441 TCRBV5S4A2TA0A5A2 114 aa20.99■□□□□ 0.95
RXRB-203ENST00000481441 TIMP1P01033 207 aa20.99■□□□□ 0.95
RXRB-203ENST00000481441 MIER1Q8N108 512 aa20.99■□□□□ 0.95
RXRB-203ENST00000481441 LCORLQ8N3X6 602 aa20.99■□□□□ 0.95
RXRB-203ENST00000481441 STARD7Q9NQZ5 370 aa20.99■□□□□ 0.95
RXRB-203ENST00000481441 FBXO28Q9NVF7 368 aa20.99■□□□□ 0.95
RXRB-203ENST00000481441 TBX21Q9UL17 535 aa20.99■□□□□ 0.95
RXRB-203ENST00000481441 SYNRGQ9UMZ2 1314 aa20.98■□□□□ 0.95
RXRB-203ENST00000481441 NCOR1O75376 2440 aa20.98■□□□□ 0.95
RXRB-203ENST00000481441 STAT3P40763 770 aa20.98■□□□□ 0.95
RXRB-203ENST00000481441 CCSAPQ6IQ19 270 aaPredicted RBP20.98■□□□□ 0.95
RXRB-203ENST00000481441 KLHDC9Q8NEP7 349 aa20.98■□□□□ 0.95
RXRB-203ENST00000481441 ZNF214Q9UL59 606 aaPredicted RBP20.98■□□□□ 0.95
RXRB-203ENST00000481441 VWA5AO00534 786 aa20.97■□□□□ 0.95
RXRB-203ENST00000481441 RASIP1Q5U651 963 aa20.97■□□□□ 0.95
RXRB-203ENST00000481441 C16orf59Q7L2K0 433 aa20.97■□□□□ 0.95
RXRB-203ENST00000481441 REPS2Q8NFH8 660 aa20.97■□□□□ 0.95
RXRB-203ENST00000481441 NUP133Q8WUM0 1156 aa20.97■□□□□ 0.95
RXRB-203ENST00000481441 CCDC17Q96LX7 622 aa20.97■□□□□ 0.95
RXRB-203ENST00000481441 CNPY2Q9Y2B0 182 aa20.97■□□□□ 0.95
RXRB-203ENST00000481441 MOXD2PA6NHM9 499 aa20.96■□□□□ 0.95
RXRB-203ENST00000481441 SMIM22K7EJ46 135 aa20.96■□□□□ 0.95
RXRB-203ENST00000481441 PBX2P40425 430 aa20.96■□□□□ 0.95
RXRB-203ENST00000481441 MFSD5Q6N075 450 aa20.96■□□□□ 0.95
RXRB-203ENST00000481441 ATXN2LQ8WWM7 1075 aaKnown RBP20.96■□□□□ 0.95
RXRB-203ENST00000481441 PBX4Q9BYU1 374 aa20.96■□□□□ 0.95
RXRB-203ENST00000481441 PPP1R9AQ9ULJ8 1098 aa20.96■□□□□ 0.95
RXRB-203ENST00000481441 EXOC6BQ9Y2D4 811 aa20.96■□□□□ 0.95
RXRB-203ENST00000481441 GRXCR1A8MXD5 290 aa20.95■□□□□ 0.94
RXRB-203ENST00000481441 EEF2P13639 858 aaKnown RBP20.95■□□□□ 0.94
RXRB-203ENST00000481441 COPB2P35606 906 aa20.95■□□□□ 0.94
RXRB-203ENST00000481441 KCNA10Q16322 511 aa20.95■□□□□ 0.94
RXRB-203ENST00000481441 TMEM240Q5SV17 173 aa20.95■□□□□ 0.94
RXRB-203ENST00000481441 AKNAD1Q5T1N1 836 aa20.95■□□□□ 0.94
RXRB-203ENST00000481441 ERC1Q8IUD2 1116 aa20.95■□□□□ 0.94
RXRB-203ENST00000481441 MSL3Q8N5Y2 521 aaKnown RBP20.95■□□□□ 0.94
RXRB-203ENST00000481441 GAS2L1Q99501 681 aaPredicted RBP20.95■□□□□ 0.94
RXRB-203ENST00000481441 ARMT1Q9H993 441 aa20.95■□□□□ 0.94
RXRB-203ENST00000481441 MYADML2A6NDP7 307 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 PRKAB2O43741 272 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 SNAI1O95863 264 aaPredicted RBP20.94■□□□□ 0.94
RXRB-203ENST00000481441 CDK8P49336 464 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 CDK7P50613 346 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 PPIGQ13427 754 aaKnown RBP eCLIP20.94■□□□□ 0.941e-25■□□□□ 10.8
RXRB-203ENST00000481441 CEP85Q6P2H3 762 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 PPM1EQ8WY54 764 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 PRDM12Q9H4Q4 367 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 FAM184BQ9ULE4 1060 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 ELP1O95163 1332 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 SYNGAP1Q96PV0 1343 aa20.94■□□□□ 0.94
RXRB-203ENST00000481441 CYP2D7A0A087X1C5 515 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 GOLIM4O00461 696 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms