RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 SAP130Q9H0E3 1048 aa8.42□□□□□ -1.06
LRCH3-216ENST00000481048 SNED1Q8TER0 1413 aa8.42□□□□□ -1.06
LRCH3-216ENST00000481048 TRPM7Q96QT4 1865 aa8.42□□□□□ -1.06
LRCH3-216ENST00000481048 UBN2Q6ZU65 1347 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 BBOX1O75936 387 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 NTSR2O95665 410 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 HSPA1AP0DMV8 641 aaKnown RBP8.41□□□□□ -1.06
LRCH3-216ENST00000481048 HSPA1BP0DMV9 641 aaKnown RBP8.41□□□□□ -1.06
LRCH3-216ENST00000481048 GPTP24298 496 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 BRD2P25440 801 aaKnown RBP8.41□□□□□ -1.06
LRCH3-216ENST00000481048 TRIP4Q15650 581 aaPredicted RBP8.41□□□□□ -1.06
LRCH3-216ENST00000481048 COL13A1Q5TAT6 717 aaPredicted RBP8.41□□□□□ -1.06
LRCH3-216ENST00000481048 LRP10Q7Z4F1 713 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 SLC51AQ86UW1 340 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.06
LRCH3-216ENST00000481048 THUMPD2Q9BTF0 503 aaKnown RBP8.41□□□□□ -1.06
LRCH3-216ENST00000481048 UTP14AQ9BVJ6 771 aaKnown RBP8.41□□□□□ -1.06
LRCH3-216ENST00000481048 PCMTD2Q9NV79 361 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 PPME1Q9Y570 386 aa8.41□□□□□ -1.06
LRCH3-216ENST00000481048 ADAMTSL1Q8N6G6 1762 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 ABCC12Q96J65 1359 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 MYBBP1AQ9BQG0 1328 aaKnown RBP8.4□□□□□ -1.06
LRCH3-216ENST00000481048 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 CHL1O00533 1208 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 HOXB7P09629 217 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 GLB1P16278 677 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 EIF2S2P20042 333 aaKnown RBP8.4□□□□□ -1.06
LRCH3-216ENST00000481048 SWI5Q1ZZU3 235 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 EAPPQ56P03 285 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-216ENST00000481048 C16orf46Q6P387 395 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 OLFM4Q6UX06 510 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 KRTAP1-3Q8IUG1 177 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 SUPT20HQ8NEM7 779 aa8.4□□□□□ -1.06
LRCH3-216ENST00000481048 DDX21Q9NR30 783 aaKnown RBP eCLIP8.4□□□□□ -1.06
LRCH3-216ENST00000481048 POLR2AP24928 1970 aaKnown RBP8.4□□□□□ -1.06
LRCH3-216ENST00000481048 CNTNAP1P78357 1384 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 SSTR4P31391 388 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 TCIRG1Q13488 830 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 COPS6Q7L5N1 327 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 CNTROBQ8N137 903 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 CACTIN-AS1Q8N1I8 211 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 RUNDC1Q96C34 613 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 KRTAP4-12Q9BQ66 201 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 RTFDC1Q9BY42 306 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-216ENST00000481048 MUC3BQ9H195 1237 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 ATP6V0A2Q9Y487 856 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 LAMB2P55268 1798 aa8.39□□□□□ -1.07
LRCH3-216ENST00000481048 SH3TC1Q8TE82 1336 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 OCLNQ16625 522 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 FAM26DQ5JW98 314 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 Q6ZS46 218 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 USP50Q70EL3 339 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-216ENST00000481048 SP8Q8IXZ3 490 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 NIM1KQ8IY84 436 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 OR13H1Q8NG92 308 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 CHMP4AQ9BY43 222 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 TAF1P21675 1872 aa8.38□□□□□ -1.07
LRCH3-216ENST00000481048 CACNA1FO60840 1977 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 LINC01387J3KSC0 135 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 PPIP5K2O43314 1243 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 WDR43Q15061 677 aaKnown RBP eCLIP8.37□□□□□ -1.07
LRCH3-216ENST00000481048 DEFB115Q30KQ5 88 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 DDX46Q7L014 1031 aaKnown RBP8.37□□□□□ -1.07
LRCH3-216ENST00000481048 NLRP10Q86W26 655 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 GALNT11Q8NCW6 608 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 PLBD2Q8NHP8 589 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 XAGE3Q8WTP9 111 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 SPACA7Q96KW9 195 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 PRDM10Q9NQV6 1147 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 DBF4Q9UBU7 674 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-216ENST00000481048 TRMT112Q9UI30 125 aaKnown RBP8.37□□□□□ -1.07
LRCH3-216ENST00000481048 ZNRF3Q9ULT6 936 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 RAXQ9Y2V3 346 aa8.37□□□□□ -1.07
LRCH3-216ENST00000481048 CDHR2Q9BYE9 1310 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 HSP90B1P14625 803 aaKnown RBP8.36□□□□□ -1.07
LRCH3-216ENST00000481048 EPS15P42566 896 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 CTCFP49711 727 aaPredicted RBP8.36□□□□□ -1.07
LRCH3-216ENST00000481048 ATP11AP98196 1134 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 MAP2K1Q02750 393 aaPredicted RBP8.36□□□□□ -1.07
LRCH3-216ENST00000481048 KIAA2012Q0VF49 1180 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 HYAL2Q12891 473 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 AIMP1Q12904 312 aaKnown RBP8.36□□□□□ -1.07
LRCH3-216ENST00000481048 DDX10Q13206 875 aaKnown RBP8.36□□□□□ -1.07
LRCH3-216ENST00000481048 GRAPQ13588 217 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 TNIP1Q15025 636 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 PROSER3Q2NL68 480 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 LCE3BQ5TA77 95 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 TXNDC11Q6PKC3 985 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 CAPN12Q6ZSI9 719 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.36□□□□□ -1.07
LRCH3-216ENST00000481048 GRAPLQ8TC17 118 aaPredicted RBP8.36□□□□□ -1.07
LRCH3-216ENST00000481048 COL26A1Q96A83 441 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 UBL7Q96S82 380 aaPredicted RBP8.36□□□□□ -1.07
LRCH3-216ENST00000481048 MKNK1Q9BUB5 465 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 LACRTQ9GZZ8 138 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms