RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 COBLO75128 1261 aa18.23■□□□□ 0.51
LIMS3-203ENST00000480744 COL6A1P12109 1028 aa18.23■□□□□ 0.51
LIMS3-203ENST00000480744 RASA1P20936 1047 aa18.23■□□□□ 0.51
LIMS3-203ENST00000480744 TMEM132BQ14DG7 1078 aa18.23■□□□□ 0.51
LIMS3-203ENST00000480744 LRRFIP1Q32MZ4 808 aaKnown RBP18.23■□□□□ 0.51
LIMS3-203ENST00000480744 TRPV1Q8NER1 839 aa18.23■□□□□ 0.51
LIMS3-203ENST00000480744 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
LIMS3-203ENST00000480744 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.23■□□□□ 0.51
LIMS3-203ENST00000480744 EPB41L4AQ9HCS5 686 aaPredicted RBP18.23■□□□□ 0.51
LIMS3-203ENST00000480744 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
LIMS3-203ENST00000480744 ROBO3Q96MS0 1386 aa18.22■□□□□ 0.51
LIMS3-203ENST00000480744 A0A1W2PPC1 479 aa18.22■□□□□ 0.51
LIMS3-203ENST00000480744 FCER1AP12319 257 aa18.22■□□□□ 0.51
LIMS3-203ENST00000480744 CYBAP13498 195 aa18.22■□□□□ 0.51
LIMS3-203ENST00000480744 GNAT2P19087 354 aa18.22■□□□□ 0.51
LIMS3-203ENST00000480744 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
LIMS3-203ENST00000480744 OLFML2BQ68BL8 750 aa18.22■□□□□ 0.51
LIMS3-203ENST00000480744 YTHDC1Q96MU7 727 aaKnown RBP18.22■□□□□ 0.51
LIMS3-203ENST00000480744 FSD1Q9BTV5 496 aa18.22■□□□□ 0.51
LIMS3-203ENST00000480744 PRDM1O75626 825 aa18.21■□□□□ 0.51
LIMS3-203ENST00000480744 SLC25A27O95847 323 aa18.21■□□□□ 0.51
LIMS3-203ENST00000480744 MYCNP04198 464 aaPredicted RBP18.21■□□□□ 0.51
LIMS3-203ENST00000480744 RRP1P56182 461 aaKnown RBP18.21■□□□□ 0.51
LIMS3-203ENST00000480744 ANO1Q5XXA6 986 aa18.21■□□□□ 0.51
LIMS3-203ENST00000480744 ABRAQ8N0Z2 381 aa18.21■□□□□ 0.51
LIMS3-203ENST00000480744 MMP19Q99542 508 aa18.21■□□□□ 0.51
LIMS3-203ENST00000480744 NUP88Q99567 741 aaPredicted RBP18.21■□□□□ 0.51
LIMS3-203ENST00000480744 GDF15Q99988 308 aa18.21■□□□□ 0.51
LIMS3-203ENST00000480744 SENP6Q9GZR1 1112 aaPredicted RBP18.21■□□□□ 0.51
LIMS3-203ENST00000480744 ZBTB47Q9UFB7 747 aaPredicted RBP18.21■□□□□ 0.51
LIMS3-203ENST00000480744 PPP1R9AQ9ULJ8 1098 aa18.21■□□□□ 0.51
LIMS3-203ENST00000480744 SMCHD1A6NHR9 2005 aa18.21■□□□□ 0.51
LIMS3-203ENST00000480744 VWA5AO00534 786 aa18.2■□□□□ 0.5
LIMS3-203ENST00000480744 MAGEA10P43363 369 aaPredicted RBP18.2■□□□□ 0.5
LIMS3-203ENST00000480744 IFNL3Q8IZI9 196 aa18.2■□□□□ 0.5
LIMS3-203ENST00000480744 ZNF444Q8N0Y2 327 aaPredicted RBP18.2■□□□□ 0.5
LIMS3-203ENST00000480744 PI4K2BQ8TCG2 481 aa18.2■□□□□ 0.5
LIMS3-203ENST00000480744 SEC62Q99442 399 aaKnown RBP18.2■□□□□ 0.5
LIMS3-203ENST00000480744 ZNF287Q9HBT7 754 aa18.2■□□□□ 0.5
LIMS3-203ENST00000480744 PATL2C9JE40 543 aaKnown RBP18.19■□□□□ 0.5
LIMS3-203ENST00000480744 SOX1O00570 391 aaPredicted RBP18.19■□□□□ 0.5
LIMS3-203ENST00000480744 IGHA2P01877 340 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 MX1P20591 662 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 STAT3P40763 770 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 ATN1P54259 1190 aaPredicted RBP18.19■□□□□ 0.5
LIMS3-203ENST00000480744 KCTD2Q14681 263 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 PRAMEF19Q5SWL8 479 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 GJC2Q5T442 439 aaPredicted RBP18.19■□□□□ 0.5
LIMS3-203ENST00000480744 RIOX2Q8IUF8 465 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 MAML3Q96JK9 1138 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 NACAP1Q9BZK3 213 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 NYAP2Q9P242 653 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 ADAMTS5Q9UNA0 930 aa18.19■□□□□ 0.5
LIMS3-203ENST00000480744 F5H6K3 240 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 DNM1LO00429 736 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 NDUFB10O96000 172 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 PGK2P07205 417 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 BMP8BP34820 402 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 SLC4A3P48751 1232 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 KLRC3Q07444 240 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 CRBNQ96SW2 442 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 SLF1Q9BQI6 1058 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 UBE2OQ9C0C9 1292 aaKnown RBP18.18■□□□□ 0.5
LIMS3-203ENST00000480744 SZT2Q5T011 3432 aa18.18■□□□□ 0.5
LIMS3-203ENST00000480744 SEPT4O43236 478 aa18.17■□□□□ 0.5
LIMS3-203ENST00000480744 ANKRD45Q5TZF3 282 aa18.17■□□□□ 0.5
LIMS3-203ENST00000480744 ARRDC4Q8NCT1 418 aa18.17■□□□□ 0.5
LIMS3-203ENST00000480744 REPS2Q8NFH8 660 aa18.17■□□□□ 0.5
LIMS3-203ENST00000480744 LRCH3Q96II8 777 aa18.17■□□□□ 0.5
LIMS3-203ENST00000480744 NAPBQ9H115 298 aa18.17■□□□□ 0.5
LIMS3-203ENST00000480744 ZNF214Q9UL59 606 aaPredicted RBP18.17■□□□□ 0.5
LIMS3-203ENST00000480744 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
LIMS3-203ENST00000480744 IGKV6D-41A0A0C4DH26 115 aa18.16■□□□□ 0.5
LIMS3-203ENST00000480744 KBTBD13C9JR72 458 aa18.16■□□□□ 0.5
LIMS3-203ENST00000480744 SLC3A2P08195 630 aaKnown RBP18.16■□□□□ 0.5
LIMS3-203ENST00000480744 TSPY3P0CV98 308 aa18.16■□□□□ 0.5
LIMS3-203ENST00000480744 TSPY8P0CW00 308 aa18.16■□□□□ 0.5
LIMS3-203ENST00000480744 COPB2P35606 906 aa18.16■□□□□ 0.5
LIMS3-203ENST00000480744 ZMYM1Q5SVZ6 1142 aa18.16■□□□□ 0.5
LIMS3-203ENST00000480744 SNRNP48Q6IEG0 339 aaKnown RBP18.16■□□□□ 0.5
LIMS3-203ENST00000480744 LRRC47Q8N1G4 583 aaKnown RBP18.16■□□□□ 0.5
LIMS3-203ENST00000480744 CEP95Q96GE4 821 aa18.16■□□□□ 0.5
LIMS3-203ENST00000480744 ISY1Q9ULR0 285 aaKnown RBP18.16■□□□□ 0.5
LIMS3-203ENST00000480744 MDM2Q00987 491 aaPredicted RBP18.15■□□□□ 0.5
LIMS3-203ENST00000480744 PDE4BQ07343 736 aa18.15■□□□□ 0.5
LIMS3-203ENST00000480744 FAM47AQ5JRC9 791 aa18.15■□□□□ 0.5
LIMS3-203ENST00000480744 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
LIMS3-203ENST00000480744 KIFC2Q96AC6 838 aa18.15■□□□□ 0.5
LIMS3-203ENST00000480744 TEX13BQ9BXU2 312 aa18.15■□□□□ 0.5
LIMS3-203ENST00000480744 MCM3APO60318 1980 aa18.15■□□□□ 0.5
LIMS3-203ENST00000480744 DNAH12Q6ZR08 3092 aa18.14■□□□□ 0.5
LIMS3-203ENST00000480744 ZBED4O75132 1171 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 TTLL1O95922 423 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 RTP1P59025 263 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 PPARAQ07869 468 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 ZNF792Q3KQV3 632 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 TDHQ8IZJ6 230 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 PRPF38AQ8NAV1 312 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms