RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
MACF1-217ENST00000480624 hCG_1642624A0A1W2PR95 340 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
MACF1-217ENST00000480624 PTPRAP18433 802 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 FOSBP53539 338 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 GPATCH4Q5T3I0 446 aaKnown RBP13.11□□□□□ -0.31
MACF1-217ENST00000480624 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 LDHDQ86WU2 507 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 RGS22Q8NE09 1264 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 FBXO18Q8NFZ0 1043 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 SHISA4Q96DD7 197 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 WDR18Q9BV38 432 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 RIOX1Q9H6W3 641 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 VCPKMTQ9H867 229 aa13.11□□□□□ -0.31
MACF1-217ENST00000480624 MYH4Q9Y623 1939 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 TRAF5O00463 557 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
MACF1-217ENST00000480624 F13A1P00488 732 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 SLC1A4P43007 532 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 GUCY1B3Q02153 619 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 FMR1Q06787 632 aaKnown RBP eCLIP13.1□□□□□ -0.31
MACF1-217ENST00000480624 MAP3K11Q16584 847 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 MOB2Q70IA6 237 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 ZNF526Q8TF50 670 aaPredicted RBP13.1□□□□□ -0.31
MACF1-217ENST00000480624 WASF1Q92558 559 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 C8orf76Q96K31 380 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
MACF1-217ENST00000480624 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 SH2D4AQ9H788 454 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 PICK1Q9NRD5 415 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 SNCAIPQ9Y6H5 919 aa13.1□□□□□ -0.31
MACF1-217ENST00000480624 ATAD5Q96QE3 1844 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 H3BQV1 296 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 RAD21O60216 631 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 BMP3P12645 472 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 NF2P35240 595 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 SLC16A2P36021 539 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 AKAP17AQ02040 695 aaKnown RBP13.09□□□□□ -0.31
MACF1-217ENST00000480624 VGLL4Q14135 290 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 DOCK1Q14185 1865 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 PFKFB3Q16875 520 aaPredicted RBP13.09□□□□□ -0.31
MACF1-217ENST00000480624 KRT40Q6A162 431 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 SPICE1Q8N0Z3 855 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 JMJD4Q9H9V9 463 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 VAT1LQ9HCJ6 419 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
MACF1-217ENST00000480624 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
MACF1-217ENST00000480624 SCG2P13521 617 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 IREB2P48200 963 aaKnown RBP13.08□□□□□ -0.32
MACF1-217ENST00000480624 SPP2Q13103 211 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 RESTQ13127 1097 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 ZYXQ15942 572 aaKnown RBP13.08□□□□□ -0.32
MACF1-217ENST00000480624 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 ADGRF4Q8IZF3 695 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 MTMR8Q96EF0 704 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 PIGSQ96S52 555 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 ZHX2Q9Y6X8 837 aa13.08□□□□□ -0.32
MACF1-217ENST00000480624 USP17L10C9JJH3 530 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 TMEM232C9JQI7 657 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 LDLRAD1Q5T700 205 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 ZNF280CQ8ND82 737 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 RRP36Q96EU6 259 aaKnown RBP13.07□□□□□ -0.32
MACF1-217ENST00000480624 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 CLMNQ96JQ2 1002 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 FEZ1Q99689 392 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 AS3MTQ9HBK9 375 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 VPS54Q9P1Q0 977 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
MACF1-217ENST00000480624 PLA2G6O60733 806 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
MACF1-217ENST00000480624 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
MACF1-217ENST00000480624 MMP1P03956 469 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 BACE1P56817 501 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 KIF23Q02241 960 aaPredicted RBP13.06□□□□□ -0.32
MACF1-217ENST00000480624 DGKZQ13574 1117 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 MTMR2Q13614 643 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 TRIM29Q14134 588 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
MACF1-217ENST00000480624 WWC2Q6AWC2 1192 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 ARMC9Q7Z3E5 817 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 ANKRD13AQ8IZ07 590 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 GPKOWQ92917 476 aaPredicted RBP eCLIP13.06□□□□□ -0.32
MACF1-217ENST00000480624 PHF20Q9BVI0 1012 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 CSADQ9Y600 493 aa13.06□□□□□ -0.32
MACF1-217ENST00000480624 PNMA6FA0A0J9YX94 578 aa13.05□□□□□ -0.32
MACF1-217ENST00000480624 TRIM75PA6NK02 468 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms