RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 LMNB1P20700 586 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 C8orf58Q8NAV2 365 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 STX2P32856 288 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 IP6K1Q92551 441 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 CABS1Q96KC9 395 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 SAR1BQ9Y6B6 198 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 SBNO1A3KN83 1393 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 B4E1Z4 1266 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 KRT10P13645 584 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 MUM1Q2TAK8 710 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 ANKFY1Q9P2R3 1169 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 SAP30BPQ9UHR5 308 aaKnown RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 PA2G4Q9UQ80 394 aaKnown RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 USTQ9Y2C2 406 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 STAT1P42224 750 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 RNASELQ05823 741 aaKnown RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 TCIRG1Q13488 830 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 VPS37BQ9H9H4 285 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 CCPG1Q9ULG6 757 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 TXNDC9O14530 226 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 APBA1Q02410 837 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 GNPTABQ3T906 1256 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 BZW2Q9Y6E2 419 aaKnown RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 TNNC2P02585 160 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 TNNI1P19237 187 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 PPP2R5DQ14738 602 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 MCF2L2Q86YR7 1114 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 TSC1Q92574 1164 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 ADPGKQ9BRR6 497 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 LSM14BQ9BX40 385 aaKnown RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 VPS16Q9H269 839 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 C19orf44Q9H6X5 657 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 GOLGA8KD6RF30 607 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 HIP1RO75146 1068 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 MAP2K2P36507 400 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 METTL14Q9HCE5 456 aaKnown RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 TCHHQ07283 1943 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 CCDC93Q567U6 631 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 DDX41Q9UJV9 622 aaKnown RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 V9GY48 417 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-212ENST00000480614 KRT19P08727 400 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 INPP1P49441 399 aa10.48□□□□□ -0.73
VEGFA-212ENST00000480614 PABPC4Q13310 644 aaKnown RBP eCLIP10.48□□□□□ -0.735e-10■■■■■ 60.6
VEGFA-212ENST00000480614 H0YIN7 160 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 KPNA2P52292 529 aaKnown RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 ASPHQ12797 758 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 YARSP54577 528 aaKnown RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 BPIFB4P59827 614 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 SCYL1Q96KG9 808 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 ARPP21Q9UBL0 812 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 CACNA1FO60840 1977 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 PTPREP23469 700 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 TRIM56Q9BRZ2 755 aaKnown RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 AOC3Q16853 763 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 DCAF15Q66K64 600 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 CTAGE3PQ8IX95 158 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 PASKQ96RG2 1323 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 RIMBP2O15034 1052 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 ITGA6P23229 1130 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 HADHQ16836 314 aaKnown RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 MIER3Q7Z3K6 550 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 TRIM11Q96F44 468 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 MED10Q9BTT4 135 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 ATP8A2Q9NTI2 1148 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 ERCC3P19447 782 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 PPP2R5AQ15172 486 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 DPP8Q6V1X1 898 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 ARHGEF37A1IGU5 675 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 RNASE9P60153 205 aaKnown RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 PRPSAP1Q14558 356 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 RAB44Q7Z6P3 723 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 CCHCR1Q8TD31 782 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 TRIM31Q9BZY9 425 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 TTLL3Q9Y4R7 772 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 ESYT2A0FGR8 921 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 RNMTO43148 476 aaKnown RBP10.47□□□□□ -0.73
VEGFA-212ENST00000480614 HSP90AA5PQ58FG0 334 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 GINS2Q9Y248 185 aa10.47□□□□□ -0.73
VEGFA-212ENST00000480614 VAMP4O75379 141 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 AS3MTQ9HBK9 375 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 CCNL1Q9UK58 526 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-212ENST00000480614 KLHL7Q8IXQ5 586 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.46□□□□□ -0.737e-6■■■■■ 27.5
VEGFA-212ENST00000480614 KRIT1O00522 736 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 TXKP42681 527 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 ZNF445P59923 1031 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 PDCD2Q16342 344 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-212ENST00000480614 CDKL2Q92772 493 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 RAD51AP2Q09MP3 1159 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 CCDC13Q8IYE1 715 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 LARGE2Q8N3Y3 721 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 TMOD1P28289 359 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 PDE6CP51160 858 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 CUEDC2Q9H467 287 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 SHROOM2Q13796 1616 aa10.46□□□□□ -0.73
VEGFA-212ENST00000480614 TTC4O95801 387 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms