RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 PPP4R3AQ6IN85 833 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 KIAA1328Q86T90 577 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 CCDC170Q8IYT3 715 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 FUKQ8N0W3 1084 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 MAB21L3Q8N8X9 362 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 P3H4Q92791 437 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 PAGE5Q96GU1 130 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 ZIM3Q96PE6 472 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 DMGDHQ9UI17 866 aaKnown RBP11.91□□□□□ -0.5
SIK3-210ENST00000480468 LUC7L2Q9Y383 392 aaKnown RBP11.91□□□□□ -0.5
SIK3-210ENST00000480468 NID2Q14112 1375 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 IDEP14735 1019 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 MDH1P40925 334 aaKnown RBP11.91□□□□□ -0.5
SIK3-210ENST00000480468 CLNS1AP54105 237 aaKnown RBP11.91□□□□□ -0.5
SIK3-210ENST00000480468 MAP2K1Q02750 393 aaPredicted RBP11.91□□□□□ -0.5
SIK3-210ENST00000480468 AIMP1Q12904 312 aaKnown RBP11.91□□□□□ -0.5
SIK3-210ENST00000480468 TSR1Q2NL82 804 aaKnown RBP11.91□□□□□ -0.5
SIK3-210ENST00000480468 CCDC121Q6ZUS5 278 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 PHKBQ93100 1093 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 TMEM87BQ96K49 555 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 CCDC114Q96M63 670 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 MYD88Q99836 296 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 LRRC1Q9BTT6 524 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 TSGA10Q9BZW7 698 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 CAPN11Q9UMQ6 739 aa11.91□□□□□ -0.5
SIK3-210ENST00000480468 TTC26A0AVF1 554 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 HMGB1P1B2RPK0 211 aaPredicted RBP11.9□□□□□ -0.5
SIK3-210ENST00000480468 ZBTB43O43298 467 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 RANBP6O60518 1105 aaKnown RBP11.9□□□□□ -0.5
SIK3-210ENST00000480468 FMNL1O95466 1100 aaPredicted RBP11.9□□□□□ -0.5
SIK3-210ENST00000480468 NR1D1P20393 614 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 ICA1Q05084 483 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 NBPF9Q3BBW0 867 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 WDR59Q6PJI9 974 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 ATG9AQ7Z3C6 839 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 SPATA4Q8NEY3 305 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 CSRNP2Q9H175 543 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 BATF3Q9NR55 127 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 CTNND2Q9UQB3 1225 aa11.9□□□□□ -0.5
SIK3-210ENST00000480468 PRAMEF22A3QJZ6 481 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 KLHL33A6NCF5 533 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 KCNJ18B7U540 433 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 ZNF185O15231 689 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 IPO7O95373 1038 aaKnown RBP11.9□□□□□ -0.51
SIK3-210ENST00000480468 IL15P40933 162 aaPredicted RBP11.9□□□□□ -0.51
SIK3-210ENST00000480468 VAV2P52735 878 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 SSRP1Q08945 709 aaKnown RBP11.9□□□□□ -0.51
SIK3-210ENST00000480468 IFT88Q13099 833 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 KCNJ12Q14500 433 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 MPRIPQ6WCQ1 1025 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 FAM228AQ86W67 206 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 DIS3L2Q8IYB7 885 aaKnown RBP11.9□□□□□ -0.51
SIK3-210ENST00000480468 TRIM58Q8NG06 486 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 HDAC7Q8WUI4 952 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 IP6K1Q92551 441 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 NEUROD6Q96NK8 337 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 VPS16Q9H269 839 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 JADE2Q9NQC1 790 aa11.9□□□□□ -0.51
SIK3-210ENST00000480468 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.51
SIK3-210ENST00000480468 BTBD18B2RXH4 712 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 TCP1P17987 556 aaKnown RBP11.89□□□□□ -0.51
SIK3-210ENST00000480468 ATP1A2P50993 1020 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 HDLBPQ00341 1268 aaKnown RBP11.89□□□□□ -0.51
SIK3-210ENST00000480468 GUCY1A3Q02108 690 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 XRCC4Q13426 336 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 LACTB2Q53H82 288 aaPredicted RBP11.89□□□□□ -0.51
SIK3-210ENST00000480468 CFAP58Q5T655 872 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 ARFGAP2Q8N6H7 521 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 APPBP2Q92624 585 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 HOOK2Q96ED9 719 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 TAB2Q9NYJ8 693 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
SIK3-210ENST00000480468 ABCC12Q96J65 1359 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
SIK3-210ENST00000480468 ZNF233A6NK53 670 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 GOLGA8AA7E2F4 631 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 LGALS16A8MUM7 142 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 IFNAR1P17181 557 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 CASP7P55210 303 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 CDK17Q00537 523 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 UBXN1Q04323 297 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 PAK1Q13153 545 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 EZH2Q15910 746 aaKnown RBP11.88□□□□□ -0.51
SIK3-210ENST00000480468 USP49Q70CQ1 688 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 ARMC9Q7Z3E5 817 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 CEP57Q86XR8 500 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 SH2D3CQ8N5H7 860 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 CYFIP2Q96F07 1278 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 ATP6V1G3Q96LB4 118 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 LACRTQ9GZZ8 138 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 CENPHQ9H3R5 247 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 PCDHB6Q9Y5E3 794 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 LTN1O94822 1766 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 MGRN1O60291 552 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 SARNPP82979 210 aaKnown RBP11.88□□□□□ -0.51
SIK3-210ENST00000480468 ANKRD20A8PQ5CZ79 823 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 NAIF1Q69YI7 327 aaPredicted RBP11.88□□□□□ -0.51
SIK3-210ENST00000480468 IFT20Q8IY31 132 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms