RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 CEP95Q96GE4 821 aa12.12□□□□□ -0.47
LINC00173-203ENST00000480237 ZBED3Q96IU2 234 aaPredicted RBP12.12□□□□□ -0.47
LINC00173-203ENST00000480237 DNAJC18Q9H819 358 aa12.12□□□□□ -0.47
LINC00173-203ENST00000480237 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
LINC00173-203ENST00000480237 CNOT7Q9UIV1 285 aaKnown RBP12.12□□□□□ -0.47
LINC00173-203ENST00000480237 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
LINC00173-203ENST00000480237 WDR81Q562E7 1941 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
LINC00173-203ENST00000480237 GUCY1B3Q02153 619 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 TNFAIP1Q13829 316 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 KIF4BQ2VIQ3 1234 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 FAM83AQ86UY5 434 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 FOXP4Q8IVH2 680 aaPredicted RBP12.11□□□□□ -0.47
LINC00173-203ENST00000480237 TMEM47Q9BQJ4 181 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 ALG1Q9BT22 464 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 UTRNP46939 3433 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
LINC00173-203ENST00000480237 H7C1D1 291 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
LINC00173-203ENST00000480237 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
LINC00173-203ENST00000480237 TRIM29Q14134 588 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 GRM4Q14833 912 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
LINC00173-203ENST00000480237 TBC1D10BQ4KMP7 808 aaPredicted RBP12.1□□□□□ -0.47
LINC00173-203ENST00000480237 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 TMTC3Q6ZXV5 915 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 GPC2Q8N158 579 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 CMTR1Q8N1G2 835 aaKnown RBP12.1□□□□□ -0.47
LINC00173-203ENST00000480237 CCDC82Q8N4S0 544 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 CHAMP1Q96JM3 812 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 CCDC17Q96LX7 622 aa12.1□□□□□ -0.47
LINC00173-203ENST00000480237 RNF26Q9BY78 433 aaPredicted RBP12.1□□□□□ -0.47
LINC00173-203ENST00000480237 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
LINC00173-203ENST00000480237 PLEKHA8P1O95397 391 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 DEXIO95424 95 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 TTLL1O95922 423 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 EGFRP00533 1210 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 SLURP2P0DP57 97 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 ATP2B2Q01814 1243 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 SAMD7Q7Z3H4 446 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 MAP3K14Q99558 947 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00173-203ENST00000480237 MTMR4Q9NYA4 1195 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 GDF11O95390 407 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 RESTQ13127 1097 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 NBPF11Q86T75 865 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 LRRC47Q8N1G4 583 aaKnown RBP12.09□□□□□ -0.47
LINC00173-203ENST00000480237 DDX12PQ92771 950 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 AIFM3Q96NN9 605 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00173-203ENST00000480237 ZSCAN16Q9H4T2 348 aaPredicted RBP12.09□□□□□ -0.47
LINC00173-203ENST00000480237 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 RLFQ13129 1914 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 KIAA1217Q5T5P2 1943 aa12.09□□□□□ -0.47
LINC00173-203ENST00000480237 FAM205CA6NFA0 338 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 FIBPO43427 364 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 PARP1P09874 1014 aaKnown RBP12.08□□□□□ -0.48
LINC00173-203ENST00000480237 GNAQP50148 359 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 KRT85P78386 507 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 ABCB5Q2M3G0 1257 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
LINC00173-203ENST00000480237 FBXO18Q8NFZ0 1043 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 CNPY2Q9Y2B0 182 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 LOC285556D6RIA3 1793 aa12.08□□□□□ -0.48
LINC00173-203ENST00000480237 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
LINC00173-203ENST00000480237 NOVP48745 357 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
LINC00173-203ENST00000480237 GNL2Q13823 731 aaKnown RBP12.07□□□□□ -0.48
LINC00173-203ENST00000480237 GPR162Q16538 588 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 C9orf131Q5VYM1 1079 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 OTUD7BQ6GQQ9 843 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 APOBEC3FQ8IUX4 373 aaKnown RBP12.07□□□□□ -0.48
LINC00173-203ENST00000480237 RGS22Q8NE09 1264 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 CABP5Q9NP86 173 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 GJB4Q9NTQ9 266 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
LINC00173-203ENST00000480237 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 HACL1Q9UJ83 578 aa12.07□□□□□ -0.48
LINC00173-203ENST00000480237 ASTN2O75129 1339 aaPredicted RBP12.07□□□□□ -0.48
LINC00173-203ENST00000480237 ZNFX1Q9P2E3 1918 aaKnown RBP12.06□□□□□ -0.48
LINC00173-203ENST00000480237 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 UBE2Q2LH0YL09 131 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 PRPF3O43395 683 aaKnown RBP12.06□□□□□ -0.48
LINC00173-203ENST00000480237 XBP1P17861 261 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 GUCY1A2P33402 732 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 ICA1Q05084 483 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 RASA3Q14644 834 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
LINC00173-203ENST00000480237 KRT40Q6A162 431 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 RASGRP2Q7LDG7 609 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 SRBD1Q8N5C6 995 aaKnown RBP12.06□□□□□ -0.48
LINC00173-203ENST00000480237 TRPM4Q8TD43 1214 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 LZTS2Q9BRK4 669 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 KANSL2Q9H9L4 492 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms