RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 FAM83BQ5T0W9 1011 aa8□□□□□ -1.13
FN1-220ENST00000480024 SHCBP1Q8NEM2 672 aa8□□□□□ -1.13
FN1-220ENST00000480024 OTUD7AQ8TE49 926 aaPredicted RBP8□□□□□ -1.13
FN1-220ENST00000480024 LRCH3Q96II8 777 aa8□□□□□ -1.13
FN1-220ENST00000480024 NUP88Q99567 741 aaPredicted RBP8□□□□□ -1.13
FN1-220ENST00000480024 GDF15Q99988 308 aa8□□□□□ -1.13
FN1-220ENST00000480024 MROH8Q9H579 483 aa8□□□□□ -1.13
FN1-220ENST00000480024 KANSL2Q9H9L4 492 aa8□□□□□ -1.13
FN1-220ENST00000480024 LTBP2Q14767 1821 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 RNF113AO15541 343 aaKnown RBP7.99□□□□□ -1.13
FN1-220ENST00000480024 STRNO43815 780 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 MSCO60682 206 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 PRDM1O75626 825 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 APPP05067 770 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 ZFYP08048 801 aaPredicted RBP7.99□□□□□ -1.13
FN1-220ENST00000480024 FCER1AP12319 257 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 RASA1P20936 1047 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 ATN1P54259 1190 aaPredicted RBP7.99□□□□□ -1.13
FN1-220ENST00000480024 SBK1Q52WX2 424 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 ANO1Q5XXA6 986 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 OLFML2BQ68BL8 750 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 FSD1Q9BTV5 496 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
FN1-220ENST00000480024 SENP6Q9GZR1 1112 aaPredicted RBP7.99□□□□□ -1.13
FN1-220ENST00000480024 MKNK2Q9HBH9 465 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 SLC5A4Q9NY91 659 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 PPP1R9AQ9ULJ8 1098 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 PCDHB15Q9Y5E8 787 aa7.99□□□□□ -1.13
FN1-220ENST00000480024 SMCHD1A6NHR9 2005 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 KBTBD13C9JR72 458 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 DNM1LO00429 736 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 VWA5AO00534 786 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 NDUFB10O96000 172 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 IGHA2P01877 340 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 PGK2P07205 417 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 GNAT2P19087 354 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 MX1P20591 662 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 RRP1P56182 461 aaKnown RBP7.98□□□□□ -1.13
FN1-220ENST00000480024 KCTD2Q14681 263 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 GJC2Q5T442 439 aaPredicted RBP7.98□□□□□ -1.13
FN1-220ENST00000480024 GIMAP6Q6P9H5 292 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 ABRAQ8N0Z2 381 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 LRRC47Q8N1G4 583 aaKnown RBP7.98□□□□□ -1.13
FN1-220ENST00000480024 PI4K2BQ8TCG2 481 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 MAML3Q96JK9 1138 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 SEC62Q99442 399 aaKnown RBP7.98□□□□□ -1.13
FN1-220ENST00000480024 MMP19Q99542 508 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 SLF1Q9BQI6 1058 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 UBE2OQ9C0C9 1292 aaKnown RBP7.98□□□□□ -1.13
FN1-220ENST00000480024 ZNF214Q9UL59 606 aaPredicted RBP7.98□□□□□ -1.13
FN1-220ENST00000480024 MCM3APO60318 1980 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 TTC41PQ6P2S7 1318 aa7.98□□□□□ -1.13
FN1-220ENST00000480024 F5H6K3 240 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 ERC2O15083 957 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 SEPT4O43236 478 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 SLC25A27O95847 323 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 BMP8BP34820 402 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 STAT3P40763 770 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 SLC4A3P48751 1232 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 RTP1P59025 263 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 MDM2Q00987 491 aaPredicted RBP7.97□□□□□ -1.13
FN1-220ENST00000480024 KLRC3Q07444 240 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 LRRFIP1Q32MZ4 808 aaKnown RBP7.97□□□□□ -1.13
FN1-220ENST00000480024 FAM47AQ5JRC9 791 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 PRAMEF19Q5SWL8 479 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 SNRNP48Q6IEG0 339 aaKnown RBP7.97□□□□□ -1.13
FN1-220ENST00000480024 RIOX2Q8IUF8 465 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 IFNL3Q8IZI9 196 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 TDHQ8IZJ6 230 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 REPS2Q8NFH8 660 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 NAPBQ9H115 298 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 NYAP2Q9P242 653 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 CLIP2Q9UDT6 1046 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 ISY1Q9ULR0 285 aaKnown RBP7.97□□□□□ -1.13
FN1-220ENST00000480024 ADAMTS5Q9UNA0 930 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 ATP11BQ9Y2G3 1177 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 PLIN4Q96Q06 1357 aa7.97□□□□□ -1.13
FN1-220ENST00000480024 IGKV6D-41A0A0C4DH26 115 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 PATL2C9JE40 543 aaKnown RBP7.96□□□□□ -1.14
FN1-220ENST00000480024 COPB2P35606 906 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 CCDC129Q6ZRS4 1044 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 ZNF444Q8N0Y2 327 aaPredicted RBP7.96□□□□□ -1.14
FN1-220ENST00000480024 ARRDC4Q8NCT1 418 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 FERMT2Q96AC1 680 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 KIFC2Q96AC6 838 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 LENG1Q96BZ8 264 aaPredicted RBP7.96□□□□□ -1.14
FN1-220ENST00000480024 CEP95Q96GE4 821 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 CRBNQ96SW2 442 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 TEX13BQ9BXU2 312 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 NACAP1Q9BZK3 213 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 ZNF287Q9HBT7 754 aa7.96□□□□□ -1.14
FN1-220ENST00000480024 PRDM5Q9NQX1 630 aaPredicted RBP7.96□□□□□ -1.14
FN1-220ENST00000480024 ZBTB47Q9UFB7 747 aaPredicted RBP7.96□□□□□ -1.14
FN1-220ENST00000480024 LAMA2P24043 3122 aaKnown RBP7.95□□□□□ -1.14
FN1-220ENST00000480024 TTLL1O95922 423 aa7.95□□□□□ -1.14
FN1-220ENST00000480024 TSPY3P0CV98 308 aa7.95□□□□□ -1.14
FN1-220ENST00000480024 TSPY8P0CW00 308 aa7.95□□□□□ -1.14
FN1-220ENST00000480024 RARBP10826 455 aa7.95□□□□□ -1.14
FN1-220ENST00000480024 TAL1P17542 331 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms