RNA–Protein interactions for RNA: ENST00000479647.1

NCBP2-212, Transcript of nuclear cap binding protein subunit 2, human

TSL 3

Gene NCBP2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP2-212	ENST00000479647	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.75	□□□□□ -0.21
NCBP2-212	ENST00000479647	ARHGEF10L	Q9HCE6	1279 aa		13.75	□□□□□ -0.21
NCBP2-212	ENST00000479647	TAL1	P17542	331 aa	Predicted RBP	13.74	□□□□□ -0.21
NCBP2-212	ENST00000479647	COL9A1	P20849	921 aa		13.74	□□□□□ -0.21
NCBP2-212	ENST00000479647	TMEM179	Q6ZVK1	233 aa		13.74	□□□□□ -0.21
NCBP2-212	ENST00000479647	AACS	Q86V21	672 aa		13.74	□□□□□ -0.21
NCBP2-212	ENST00000479647	ABRA	Q8N0Z2	381 aa		13.74	□□□□□ -0.21
NCBP2-212	ENST00000479647	MYH7	P12883	1935 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	TNFRSF10A	O00220	468 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	KIAA0355	O15063	1070 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	RAD21	O60216	631 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	AKR1B1	P15121	316 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	ICA1	Q05084	483 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	TMEM132B	Q14DG7	1078 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	CCDC129	Q6ZRS4	1044 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	DYNLL2	Q96FJ2	89 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	BCL11A	Q9H165	835 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	ZNF576	Q9H609	170 aa		13.73	□□□□□ -0.21
NCBP2-212	ENST00000479647	TCF20	Q9UGU0	1960 aa	Known RBP	13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	DCDC2C	A8MYV0	355 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	SLC25A27	O95847	323 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	PDE6A	P16499	860 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	KCTD2	Q14681	263 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	SLC9C2	Q5TAH2	1124 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	ZKSCAN2	Q63HK3	967 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	ITPRIP	Q8IWB1	547 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	LCORL	Q8N3X6	602 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	TIFA	Q96CG3	184 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	GAS2L1	Q99501	681 aa	Predicted RBP	13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	TINF2	Q9BSI4	451 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	SH2D4A	Q9H788	454 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	VCPKMT	Q9H867	229 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	STARD7	Q9NQZ5	370 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	FBXO28	Q9NVF7	368 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	RAPGEFL1	Q9UHV5	662 aa		13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	NOP58	Q9Y2X3	529 aa	Known RBP	13.72	□□□□□ -0.21
NCBP2-212	ENST00000479647	ZNF532	Q9HCE3	1301 aa		13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	WDR46	O15213	610 aa	Known RBP	13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	AKR1A1	P14550	325 aa		13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	FAAP100	Q0VG06	881 aa		13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	FTSJ3	Q8IY81	847 aa	Known RBP	13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	DNAJC2	Q99543	621 aa	Known RBP	13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.71	□□□□□ -0.21	6e-9	■□□□□ 8.5
NCBP2-212	ENST00000479647	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	SWAP70	Q9UH65	585 aa		13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	NRBP1	Q9UHY1	535 aa		13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	CNPY2	Q9Y2B0	182 aa		13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	EXOC6B	Q9Y2D4	811 aa		13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	TMX2	Q9Y320	296 aa		13.71	□□□□□ -0.21
NCBP2-212	ENST00000479647	MYH4	Q9Y623	1939 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	SYNRG	Q9UMZ2	1314 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	GRXCR1	A8MXD5	290 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	APBB1	O00213	710 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	ACLY	P53396	1101 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	TTF1	Q15361	905 aa	Predicted RBP	13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	ZNF792	Q3KQV3	632 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	NUP133	Q8WUM0	1156 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	PRDM12	Q9H4Q4	367 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	ARMT1	Q9H993	441 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	IL1RAPL2	Q9NP60	686 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	ROBO3	Q96MS0	1386 aa		13.7	□□□□□ -0.22
NCBP2-212	ENST00000479647	CYP2D7	A0A087X1C5	515 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	GOLIM4	O00461	696 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	ADAMTS4	O75173	837 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	PBX2	P40425	430 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	STAT3	P40763	770 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	SLC4A3	P48751	1232 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	TMED8	Q6PL24	325 aa	Predicted RBP	13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	RIOX2	Q8IUF8	465 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	SIAH1	Q8IUQ4	282 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	VTI1A	Q96AJ9	217 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	NCOR1	O75376	2440 aa		13.69	□□□□□ -0.22
NCBP2-212	ENST00000479647	MYADML2	A6NDP7	307 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	SMIM22	K7EJ46	135 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	PRKAB2	O43741	272 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	TIMP1	P01033	207 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	EEF2	P13639	858 aa	Known RBP	13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	IRX5	P78411	483 aa	Predicted RBP	13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	PPIG	Q13427	754 aa	Known RBP eCLIP	13.68	□□□□□ -0.22	7e-9	■■■□□ 18.1
NCBP2-212	ENST00000479647	CCDC85B	Q15834	202 aa	Predicted RBP	13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	KCNA10	Q16322	511 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	FAM83B	Q5T0W9	1011 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	ANKRD33	Q7Z3H0	272 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	ERC1	Q8IUD2	1116 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	TOX2	Q96NM4	488 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	TSEN34	Q9BSV6	310 aa	Known RBP	13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	PBX4	Q9BYU1	374 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	PPP1R12C	Q9BZL4	782 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	THEG	Q9P2T0	379 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	FAM184B	Q9ULE4	1060 aa		13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	DIS3	Q9Y2L1	958 aa	Known RBP	13.68	□□□□□ -0.22
NCBP2-212	ENST00000479647	MUC3A	Q02505	3323 aa		13.67	□□□□□ -0.22
NCBP2-212	ENST00000479647	MOXD2P	A6NHM9	499 aa		13.67	□□□□□ -0.22
NCBP2-212	ENST00000479647	VWA5A	O00534	786 aa		13.67	□□□□□ -0.22
NCBP2-212	ENST00000479647	MBD4	O95243	580 aa		13.67	□□□□□ -0.22
NCBP2-212	ENST00000479647	C6orf222	P0C671	652 aa	Predicted RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms