RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 NBPF12Q5TAG4 269 aaPredicted RBP7.55□□□□□ -1.2
LMBR1-216ENST00000477983 RNF111Q6ZNA4 994 aa7.55□□□□□ -1.2
LMBR1-216ENST00000477983 ZNF296Q8WUU4 475 aaPredicted RBP7.55□□□□□ -1.2
LMBR1-216ENST00000477983 SHISA4Q96DD7 197 aa7.55□□□□□ -1.2
LMBR1-216ENST00000477983 ASCC2Q9H1I8 757 aaPredicted RBP7.55□□□□□ -1.2
LMBR1-216ENST00000477983 NPIPB6E9PJ23 425 aa7.54□□□□□ -1.2
LMBR1-216ENST00000477983 PEX10O60683 326 aa7.54□□□□□ -1.2
LMBR1-216ENST00000477983 RAG1P15918 1043 aa7.54□□□□□ -1.2
LMBR1-216ENST00000477983 KCNA10Q16322 511 aa7.54□□□□□ -1.2
LMBR1-216ENST00000477983 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
LMBR1-216ENST00000477983 REXO1Q8N1G1 1221 aaKnown RBP7.54□□□□□ -1.2
LMBR1-216ENST00000477983 CNNM2Q9H8M5 875 aa7.54□□□□□ -1.2
LMBR1-216ENST00000477983 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
LMBR1-216ENST00000477983 TCAF2A6NFQ2 919 aa7.53□□□□□ -1.2
LMBR1-216ENST00000477983 NOTOA8MTQ0 251 aa7.53□□□□□ -1.2
LMBR1-216ENST00000477983 ZSCAN22P10073 491 aaPredicted RBP7.53□□□□□ -1.2
LMBR1-216ENST00000477983 CCNFP41002 786 aa7.53□□□□□ -1.2
LMBR1-216ENST00000477983 CRKP46108 304 aa7.53□□□□□ -1.2
LMBR1-216ENST00000477983 CHMP4BP1P59074 171 aa7.53□□□□□ -1.2
LMBR1-216ENST00000477983 RAD51AP2Q09MP3 1159 aa7.53□□□□□ -1.2
LMBR1-216ENST00000477983 ZNF655Q8N720 491 aaPredicted RBP7.53□□□□□ -1.2
LMBR1-216ENST00000477983 ATG4CQ96DT6 458 aa7.53□□□□□ -1.2
LMBR1-216ENST00000477983 INTS4Q96HW7 963 aaKnown RBP7.53□□□□□ -1.2
LMBR1-216ENST00000477983 ZNF552Q9H707 407 aaPredicted RBP7.53□□□□□ -1.2
LMBR1-216ENST00000477983 ADAMTS1Q9UHI8 967 aa7.53□□□□□ -1.2
LMBR1-216ENST00000477983 PSPNO60542 156 aa7.52□□□□□ -1.21
LMBR1-216ENST00000477983 ZNF326Q5BKZ1 582 aaKnown RBP7.52□□□□□ -1.21
LMBR1-216ENST00000477983 OVOS1Q6IE37 1185 aa7.52□□□□□ -1.21
LMBR1-216ENST00000477983 HS2ST1Q7LGA3 356 aa7.52□□□□□ -1.21
LMBR1-216ENST00000477983 LINC00116Q8NCU8 138 aa7.52□□□□□ -1.21
LMBR1-216ENST00000477983 TCTN2Q96GX1 697 aa7.52□□□□□ -1.21
LMBR1-216ENST00000477983 BCL2L13Q9BXK5 485 aa7.52□□□□□ -1.21
LMBR1-216ENST00000477983 MCOLN1Q9GZU1 580 aa7.52□□□□□ -1.21
LMBR1-216ENST00000477983 GGT7Q9UJ14 662 aa7.52□□□□□ -1.21
LMBR1-216ENST00000477983 MYOCOSA0A1B0GUC4 107 aa7.51□□□□□ -1.21
LMBR1-216ENST00000477983 KRTAP4-11Q9BYQ6 195 aa7.51□□□□□ -1.21
LMBR1-216ENST00000477983 SEMA7AO75326 666 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 KIR2DL1P43626 348 aaPredicted RBP7.5□□□□□ -1.21
LMBR1-216ENST00000477983 KIR2DL2P43627 348 aaPredicted RBP7.5□□□□□ -1.21
LMBR1-216ENST00000477983 CLCQ05315 142 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 NLRC3Q7RTR2 1065 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 TMC3Q7Z5M5 1100 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 NLRX1Q86UT6 975 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 SLITRK4Q8IW52 837 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 NT5C1AQ9BXI3 368 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 UBP1Q9NZI7 540 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 GPR160Q9UJ42 338 aa7.5□□□□□ -1.21
LMBR1-216ENST00000477983 SHROOM4Q9ULL8 1493 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 TEX51A0A1B0GUA7 166 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 MEIS3P2A8K0S8 358 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 NRDCO43847 1150 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 RPL10P27635 214 aaKnown RBP7.49□□□□□ -1.21
LMBR1-216ENST00000477983 PCBP3P57721 371 aaKnown RBP7.49□□□□□ -1.21
LMBR1-216ENST00000477983 LINC00310P59036 64 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 DLG4P78352 724 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 SNW1Q13573 536 aaKnown RBP7.49□□□□□ -1.21
LMBR1-216ENST00000477983 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
LMBR1-216ENST00000477983 SEZ6Q53EL9 994 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 CIAPIN1Q6FI81 312 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 GIPC2Q8TF65 315 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 FOXP3Q9BZS1 431 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 RAPGEFL1Q9UHV5 662 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 TCFL5Q9UL49 500 aa7.49□□□□□ -1.21
LMBR1-216ENST00000477983 ABCC9O60706 1549 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 TMEM82A0PJX8 343 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 TNFRSF10CO14798 259 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 NME1P15531 152 aaKnown RBP7.48□□□□□ -1.21
LMBR1-216ENST00000477983 POLR2BP30876 1174 aaKnown RBP7.48□□□□□ -1.21
LMBR1-216ENST00000477983 ZNF165P49910 485 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 GK5Q6ZS86 529 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 ZNF605Q86T29 641 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 MAP6Q96JE9 813 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 CRTAC1Q9NQ79 661 aa7.48□□□□□ -1.21
LMBR1-216ENST00000477983 SIGLEC6O43699 453 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 CLEC3AO75596 197 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 EFEMP2O95967 443 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 APOBRQ0VD83 1088 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 BBS9Q3SYG4 887 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 WAPLQ7Z5K2 1190 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 PRDM14Q9GZV8 571 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 GCM1Q9NP62 436 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 ZMYM5Q9UJ78 669 aa7.47□□□□□ -1.21
LMBR1-216ENST00000477983 SSU72P8A0A1W2PR75 194 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 HRKO00198 91 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 PRAMEF1O95521 474 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 PDE6BP35913 854 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 TTLL10Q6ZVT0 673 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 TMEM192Q8IY95 271 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 NKD1Q969G9 470 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 EAF1Q96JC9 268 aaPredicted RBP7.46□□□□□ -1.22
LMBR1-216ENST00000477983 HHIPL1Q96JK4 782 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 ANTXR1Q9H6X2 564 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 DCAF1Q9Y4B6 1507 aa7.46□□□□□ -1.22
LMBR1-216ENST00000477983 OR14I1A6ND48 311 aa7.45□□□□□ -1.22
LMBR1-216ENST00000477983 USP2O75604 605 aaPredicted RBP7.45□□□□□ -1.22
LMBR1-216ENST00000477983 MCM4P33991 863 aa7.45□□□□□ -1.22
LMBR1-216ENST00000477983 GALK1P51570 392 aa7.45□□□□□ -1.22
LMBR1-216ENST00000477983 INTS3Q68E01 1043 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms