RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 KIF4BQ2VIQ3 1234 aa8.69□□□□□ -1.02
USP33-208ENST00000477949 DPP8Q6V1X1 898 aaPredicted RBP8.69□□□□□ -1.02
USP33-208ENST00000477949 NBPF11Q86T75 865 aa8.69□□□□□ -1.02
USP33-208ENST00000477949 SSBP4Q9BWG4 385 aaPredicted RBP8.69□□□□□ -1.02
USP33-208ENST00000477949 KRTAP9-2Q9BYQ4 174 aa8.69□□□□□ -1.02
USP33-208ENST00000477949 FRRS1LQ9P0K9 344 aa8.69□□□□□ -1.02
USP33-208ENST00000477949 PSME4Q14997 1843 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 SNRPA1P09661 255 aaKnown RBP8.68□□□□□ -1.02
USP33-208ENST00000477949 CPB1P15086 417 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 RPS12P25398 132 aaKnown RBP8.68□□□□□ -1.02
USP33-208ENST00000477949 CRTC2Q53ET0 693 aaPredicted RBP8.68□□□□□ -1.02
USP33-208ENST00000477949 MORC1Q86VD1 984 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 FBXO11Q86XK2 927 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 SP8Q8IXZ3 490 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 ZNF34Q8IZ26 560 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 KCNQ5Q9NR82 932 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 PTPN22Q9Y2R2 807 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 TRIM17Q9Y577 477 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 MAP3K15Q6ZN16 1313 aa8.68□□□□□ -1.02
USP33-208ENST00000477949 BTBD11A6QL63 1104 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.67□□□□□ -1.02
USP33-208ENST00000477949 UBE2Q2LH0YL09 131 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 LGR5O75473 907 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 GPTP24298 496 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
USP33-208ENST00000477949 IDH3AP50213 366 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 ZNF280AP59817 542 aaPredicted RBP8.67□□□□□ -1.02
USP33-208ENST00000477949 SLC10A5Q5PT55 438 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 TTLL7Q6ZT98 887 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 ANKMY2Q8IV38 441 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 TTC9Q92623 222 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 PANK3Q9H999 370 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 KLK14Q9P0G3 267 aa8.67□□□□□ -1.02
USP33-208ENST00000477949 ZBTB42B2RXF5 422 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 SOX1O00570 391 aaPredicted RBP8.66□□□□□ -1.02
USP33-208ENST00000477949 TARSP26639 723 aaKnown RBP8.66□□□□□ -1.02
USP33-208ENST00000477949 LRP8Q14114 963 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 GRIK5Q16478 980 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 PERM1Q5SV97 790 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 ANGEL2Q5VTE6 544 aaKnown RBP8.66□□□□□ -1.02
USP33-208ENST00000477949 ELMSAN1Q6PJG2 1045 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 DHX32Q7L7V1 743 aaKnown RBP8.66□□□□□ -1.02
USP33-208ENST00000477949 WFDC12Q8WWY7 111 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 CLUAP1Q96AJ1 413 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 LPIN3Q9BQK8 851 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 PPP1R12CQ9BZL4 782 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 VRTNQ9H8Y1 702 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 ZFATQ9P243 1243 aa8.66□□□□□ -1.02
USP33-208ENST00000477949 ZNF646O15015 1829 aaPredicted RBP8.66□□□□□ -1.02
USP33-208ENST00000477949 BBOX1O75936 387 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 VIL1P09327 827 aaKnown RBP8.65□□□□□ -1.02
USP33-208ENST00000477949 PLA2G5P39877 138 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 ARSDP51689 593 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 SREBF2Q12772 1141 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 IGF2-ASQ6U949 168 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 WFDC8Q8IUA0 241 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 IFT43Q96FT9 208 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 DBNDD1Q9H9R9 158 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 EYSQ5T1H1 3165 aa8.65□□□□□ -1.02
USP33-208ENST00000477949 FAM196BA6NMK8 535 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 IGF2BP3O00425 579 aaKnown RBP eCLIP8.64□□□□□ -1.03
USP33-208ENST00000477949 HYAL3O43820 417 aaPredicted RBP8.64□□□□□ -1.03
USP33-208ENST00000477949 SASH3O75995 380 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 MICAL2O94851 1124 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 ARID4AP29374 1257 aaPredicted RBP8.64□□□□□ -1.03
USP33-208ENST00000477949 C11orf91Q3C1V1 193 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 PRAMEF18Q5VWM3 479 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 KRT25Q7Z3Z0 450 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 LRP10Q7Z4F1 713 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 CD99L2Q8TCZ2 262 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 SHISA4Q96DD7 197 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 CALR3Q96L12 384 aaKnown RBP8.64□□□□□ -1.03
USP33-208ENST00000477949 GMLQ99445 158 aa8.64□□□□□ -1.03
USP33-208ENST00000477949 SCAF8Q9UPN6 1271 aaKnown RBP8.64□□□□□ -1.03
USP33-208ENST00000477949 PRUNE2Q8WUY3 3088 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 KRTAP9-6A0A140TA67 174 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 ECE2O60344 883 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 RARAP10276 462 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 IREB2P48200 963 aaKnown RBP8.63□□□□□ -1.03
USP33-208ENST00000477949 GPLD1P80108 840 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 GRAPQ13588 217 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 LDLRAD1Q5T700 205 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 UBE2Q1Q7Z7E8 422 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 GRAPLQ8TC17 118 aaPredicted RBP8.63□□□□□ -1.03
USP33-208ENST00000477949 VTI1AQ96AJ9 217 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 PHACTR3Q96KR7 559 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP33-208ENST00000477949 POLLQ9UGP5 575 aa8.63□□□□□ -1.03
USP33-208ENST00000477949 USP17L15C9J2P7 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L10C9JJH3 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L13C9JLJ4 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L12C9JPN9 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L11C9JVI0 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L21D6R901 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L18D6R9N7 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L22D6RA61 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L17D6RBQ6 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L19D6RCP7 530 aa8.62□□□□□ -1.03
USP33-208ENST00000477949 USP17L20D6RJB6 530 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms