RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KREMEN1Q96MU8 473 aa7.45□□□□□ -1.22
VPS50-214ENST00000477935 ACBD3Q9H3P7 528 aa7.45□□□□□ -1.22
VPS50-214ENST00000477935 SEMA3GQ9NS98 782 aa7.45□□□□□ -1.22
VPS50-214ENST00000477935 H3BS24 57 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 GJA8P48165 433 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 ANGEL2Q5VTE6 544 aaKnown RBP7.44□□□□□ -1.22
VPS50-214ENST00000477935 DTWD2Q8NBA8 298 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 RASGRP4Q8TDF6 673 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 SPATA32Q96LK8 384 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 FERD3LQ96RJ6 166 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 GINM1Q9NU53 330 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 PPT2Q9UMR5 302 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 PTPRTO14522 1441 aa7.44□□□□□ -1.22
VPS50-214ENST00000477935 MADDQ8WXG6 1647 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 IMPDH2P12268 514 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 NME1P15531 152 aaKnown RBP7.43□□□□□ -1.22
VPS50-214ENST00000477935 FUT4P22083 530 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 COL9A2Q14055 689 aaPredicted RBP7.43□□□□□ -1.22
VPS50-214ENST00000477935 PLCL1Q15111 1095 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 FAM9AQ8IZU1 332 aaPredicted RBP7.43□□□□□ -1.22
VPS50-214ENST00000477935 VWCEQ96DN2 955 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 ATP13A1Q9HD20 1204 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 ADGRE2Q9UHX3 823 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 KCNH3Q9ULD8 1083 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 CFAP43Q8NDM7 1665 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 BCORL1Q5H9F3 1711 aa7.43□□□□□ -1.22
VPS50-214ENST00000477935 TNFRSF10CO14798 259 aa7.42□□□□□ -1.22
VPS50-214ENST00000477935 ERCC5P28715 1186 aaPredicted RBP7.42□□□□□ -1.22
VPS50-214ENST00000477935 IRAK1P51617 712 aa7.42□□□□□ -1.22
VPS50-214ENST00000477935 CHMP4BP1P59074 171 aa7.42□□□□□ -1.22
VPS50-214ENST00000477935 IKZF1Q13422 519 aa7.42□□□□□ -1.22
VPS50-214ENST00000477935 THAP5Q7Z6K1 395 aa7.42□□□□□ -1.22
VPS50-214ENST00000477935 ASPNQ9BXN1 380 aa7.42□□□□□ -1.22
VPS50-214ENST00000477935 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS50-214ENST00000477935 CCSER2Q9H7U1 834 aa7.42□□□□□ -1.22
VPS50-214ENST00000477935 EFR3BQ9Y2G0 817 aa7.42□□□□□ -1.22
VPS50-214ENST00000477935 BIVM-ERCC5R4GMW8 1640 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 LRRN2O75325 713 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 CCNFP41002 786 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 SOX9P48436 509 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 FBXW10Q5XX13 1052 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 CBLL1Q75N03 491 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 UBE2FQ969M7 185 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 ZSWIM5Q9P217 1185 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 INPP5FQ9Y2H2 1132 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 CARMIL1Q5VZK9 1371 aa7.41□□□□□ -1.22
VPS50-214ENST00000477935 ZCCHC11Q5TAX3 1644 aaKnown RBP7.41□□□□□ -1.22
VPS50-214ENST00000477935 ACRP10323 421 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 SRFP11831 508 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 ZP2Q05996 745 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 ZNF792Q3KQV3 632 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 CCDC81Q6ZN84 652 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 RBBP8NLQ8NC74 664 aaPredicted RBP7.4□□□□□ -1.22
VPS50-214ENST00000477935 SLC9A7Q96T83 725 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 GPR62Q9BZJ7 368 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 DUSP15Q9H1R2 295 aaPredicted RBP7.4□□□□□ -1.22
VPS50-214ENST00000477935 ADAMTS6Q9UKP5 1117 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 KIF27Q86VH2 1401 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 DISP1Q96F81 1524 aa7.4□□□□□ -1.22
VPS50-214ENST00000477935 NEO1Q92859 1461 aa7.39□□□□□ -1.23
VPS50-214ENST00000477935 CLEC3AO75596 197 aa7.39□□□□□ -1.23
VPS50-214ENST00000477935 RNASE1P07998 156 aaKnown RBP7.39□□□□□ -1.23
VPS50-214ENST00000477935 INTS3Q68E01 1043 aaKnown RBP7.39□□□□□ -1.23
VPS50-214ENST00000477935 PI4K2BQ8TCG2 481 aa7.39□□□□□ -1.23
VPS50-214ENST00000477935 TM9SF2Q99805 663 aa7.39□□□□□ -1.23
VPS50-214ENST00000477935 TRIT1Q9H3H1 467 aaKnown RBP7.39□□□□□ -1.23
VPS50-214ENST00000477935 PRDM7Q9NQW5 492 aa7.39□□□□□ -1.23
VPS50-214ENST00000477935 WASH4PA8MWX3 477 aa7.38□□□□□ -1.23
VPS50-214ENST00000477935 E9PSI1 815 aa7.38□□□□□ -1.23
VPS50-214ENST00000477935 TPP2P29144 1249 aaPredicted RBP7.38□□□□□ -1.23
VPS50-214ENST00000477935 RNF4P78317 190 aa7.38□□□□□ -1.23
VPS50-214ENST00000477935 NBPF12Q5TAG4 269 aaPredicted RBP7.38□□□□□ -1.23
VPS50-214ENST00000477935 SLC23A3Q6PIS1 610 aa7.38□□□□□ -1.23
VPS50-214ENST00000477935 LSRQ86X29 649 aaPredicted RBP7.38□□□□□ -1.23
VPS50-214ENST00000477935 TMEM192Q8IY95 271 aa7.38□□□□□ -1.23
VPS50-214ENST00000477935 TAB3Q8N5C8 712 aaPredicted RBP7.38□□□□□ -1.23
VPS50-214ENST00000477935 SLC6A18Q96N87 628 aa7.38□□□□□ -1.23
VPS50-214ENST00000477935 CARS2Q9HA77 564 aaKnown RBP7.38□□□□□ -1.23
VPS50-214ENST00000477935 MBNL3Q9NUK0 354 aaKnown RBP7.38□□□□□ -1.23
VPS50-214ENST00000477935 GPATCH2Q9NW75 528 aa7.38□□□□□ -1.23
VPS50-214ENST00000477935 LMCD1Q9NZU5 365 aa7.38□□□□□ -1.23
VPS50-214ENST00000477935 FANCAO15360 1455 aa7.37□□□□□ -1.23
VPS50-214ENST00000477935 AKNAQ7Z591 1439 aa7.37□□□□□ -1.23
VPS50-214ENST00000477935 FAM86C2PA6NEL3 165 aa7.37□□□□□ -1.23
VPS50-214ENST00000477935 NASPP49321 788 aaPredicted RBP7.37□□□□□ -1.23
VPS50-214ENST00000477935 RUFY4Q6ZNE9 571 aa7.37□□□□□ -1.23
VPS50-214ENST00000477935 TMPRSS7Q7RTY8 843 aa7.37□□□□□ -1.23
VPS50-214ENST00000477935 ZNF512BQ96KM6 892 aaPredicted RBP7.37□□□□□ -1.23
VPS50-214ENST00000477935 CRBNQ96SW2 442 aa7.37□□□□□ -1.23
VPS50-214ENST00000477935 SRRTQ9BXP5 876 aaKnown RBP7.37□□□□□ -1.23
VPS50-214ENST00000477935 IQGAP2Q13576 1575 aa7.37□□□□□ -1.23
VPS50-214ENST00000477935 RIMS1Q86UR5 1692 aaKnown RBP7.36□□□□□ -1.23
VPS50-214ENST00000477935 SHISA3A0PJX4 238 aa7.36□□□□□ -1.23
VPS50-214ENST00000477935 ESR1P03372 595 aa7.36□□□□□ -1.23
VPS50-214ENST00000477935 TAL1P17542 331 aaPredicted RBP7.36□□□□□ -1.23
VPS50-214ENST00000477935 GUCY2CP25092 1073 aa7.36□□□□□ -1.23
VPS50-214ENST00000477935 EIF6P56537 245 aaKnown RBP7.36□□□□□ -1.23
VPS50-214ENST00000477935 GAB4Q2WGN9 574 aa7.36□□□□□ -1.23
VPS50-214ENST00000477935 MCTP1Q6DN14 999 aa7.36□□□□□ -1.23
VPS50-214ENST00000477935 TSPYL5Q86VY4 417 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms