RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 KRT40Q6A162 431 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 VTI1AQ96AJ9 217 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 FBXL18Q96ME1 805 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 GLT1D1Q96MS3 346 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 KIAA1683Q9H0B3 1180 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 CERS4Q9HA82 394 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 HMG20BQ9P0W2 317 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 PCDHA11Q9Y5I1 949 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 SYNRGQ9UMZ2 1314 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 TRIOO75962 3097 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 CDK5RAP2Q96SN8 1893 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 BAG3O95817 575 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 HLA-DOAP06340 250 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 FCER1AP12319 257 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 CDK7P50613 346 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 COG2Q14746 738 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 ATF7IPQ6VMQ6 1270 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 ABRAQ8N0Z2 381 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 TINF2Q9BSI4 451 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 MROH8Q9H579 483 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 HOXC10Q9NYD6 342 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 SLC4A7Q9Y6M7 1214 aa11.92□□□□□ -0.5
SMARCB1-206ENST00000477836 A0A1B0GUL7 405 aa11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 TLR3O15455 904 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 ZNF865P0CJ78 1059 aaPredicted RBP11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 CCSAPQ6IQ19 270 aaPredicted RBP11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 SPATA5Q8NB90 893 aa11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 KLHDC9Q8NEP7 349 aa11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 TANGO6Q9C0B7 1094 aa11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 LRP2BPQ9P2M1 347 aa11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 PA2G4Q9UQ80 394 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 ZNFX1Q9P2E3 1918 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 ROBO3Q96MS0 1386 aa11.91□□□□□ -0.5
SMARCB1-206ENST00000477836 ELP1O95163 1332 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 MYADML2A6NDP7 307 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 EPOPA6NHQ4 379 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 ZBBXA8MT70 800 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 ARVCFO00192 962 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 PGK2P07205 417 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 CA3P07451 260 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 PLCG2P16885 1265 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 TATDN1Q6P1N9 297 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 FAM126BQ8IXS8 530 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 GJD3Q8N144 294 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 KCNH6Q9H252 994 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 CACNA1AO00555 2505 aa11.9□□□□□ -0.5
SMARCB1-206ENST00000477836 UMODL1Q5DID0 1318 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 ASGR1P07306 291 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 ALADP13716 330 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 ATP2A2P16615 1042 aaKnown RBP11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 CCL23P55773 120 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 ABCB5Q2M3G0 1257 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 CERKLQ49MI3 558 aaPredicted RBP11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 NAA16Q6N069 864 aaPredicted RBP11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 NEUROD6Q96NK8 337 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 MMP19Q99542 508 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 CNPY2Q9Y2B0 182 aa11.89□□□□□ -0.51
SMARCB1-206ENST00000477836 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 PPP4CP60510 307 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 ZNF792Q3KQV3 632 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 GORABQ5T7V8 394 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 ADGRA1Q86SQ6 560 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 MB21D1Q8N884 522 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 ARNTL2Q8WYA1 636 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 PHOX2BQ99453 314 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 HIPK3Q9H422 1215 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 CABP5Q9NP86 173 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 FAM184BQ9ULE4 1060 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 AKAP2Q9Y2D5 859 aa11.88□□□□□ -0.51
SMARCB1-206ENST00000477836 CD4P01730 458 aa11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 DSG3P32926 999 aa11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 TFCP2Q12800 502 aa11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 KCTD2Q14681 263 aa11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 PCSK9Q8NBP7 692 aaKnown RBP11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 ATG4CQ96DT6 458 aa11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 SERPINB13Q9UIV8 391 aa11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 DIS3Q9Y2L1 958 aaKnown RBP11.87□□□□□ -0.51
SMARCB1-206ENST00000477836 A0A1W2PRG0 241 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 E9PSI1 815 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 ST18O60284 1047 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 DUSP11O75319 330 aaKnown RBP11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 SLC25A27O95847 323 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 GUCY1A2P33402 732 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 MCAMP43121 646 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 TMEM132BQ14DG7 1078 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms