RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 POTEEQ6S8J3 1075 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 USP6NLQ92738 828 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 GOPCQ9HD26 462 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 NR2E3Q9Y5X4 410 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 SPDYE16A6NNV3 312 aaPredicted RBP16.77■□□□□ 0.28
PDE6D-204ENST00000477748 WDR46O15213 610 aaKnown RBP16.77■□□□□ 0.28
PDE6D-204ENST00000477748 CNMDO75829 334 aa16.77■□□□□ 0.28
PDE6D-204ENST00000477748 FGAP02671 866 aa16.77■□□□□ 0.28
PDE6D-204ENST00000477748 TSPY3P0CV98 308 aa16.77■□□□□ 0.28
PDE6D-204ENST00000477748 TSPY8P0CW00 308 aa16.77■□□□□ 0.28
PDE6D-204ENST00000477748 PRKAR2AP13861 404 aaKnown RBP16.77■□□□□ 0.28
PDE6D-204ENST00000477748 GSPT1P15170 499 aaKnown RBP16.77■□□□□ 0.28
PDE6D-204ENST00000477748 COG2Q14746 738 aa16.77■□□□□ 0.28
PDE6D-204ENST00000477748 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.28
PDE6D-204ENST00000477748 PLXNB2O15031 1838 aa16.77■□□□□ 0.27
PDE6D-204ENST00000477748 IGKV6D-41A0A0C4DH26 115 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 DLL1O00548 723 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 TFAP4Q01664 338 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 TRIM32Q13049 653 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 NEDD1Q8NHV4 660 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 HOXC10Q9NYD6 342 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 CLIP2Q9UDT6 1046 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 ANAPC4Q9UJX5 808 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
PDE6D-204ENST00000477748 SZT2Q5T011 3432 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 RLFQ13129 1914 aa16.76■□□□□ 0.27
PDE6D-204ENST00000477748 SLC15A5A6NIM6 579 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 FLOT1O75955 427 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 MAP2K5Q13163 448 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
PDE6D-204ENST00000477748 NECAB2Q7Z6G3 386 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 MB21D1Q8N884 522 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 CEP95Q96GE4 821 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 MTMR4Q9NYA4 1195 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 IVNS1ABPQ9Y6Y0 642 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 PLIN4Q96Q06 1357 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 PARP14Q460N5 1801 aa16.75■□□□□ 0.27
PDE6D-204ENST00000477748 ZMYM6O95789 1325 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 TSPY2A6NKD2 308 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 RANBP6O60518 1105 aaKnown RBP16.74■□□□□ 0.27
PDE6D-204ENST00000477748 TTLL1O95922 423 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 DSG3P32926 999 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 HAND2P61296 217 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
PDE6D-204ENST00000477748 WDR78Q5VTH9 848 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 PAWRQ96IZ0 340 aaKnown RBP16.74■□□□□ 0.27
PDE6D-204ENST00000477748 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 BTBD7Q9P203 1132 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 LAMA3Q16787 3333 aa16.74■□□□□ 0.27
PDE6D-204ENST00000477748 F5H6K3 240 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 ORC4O43929 436 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 EVI5O60447 810 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 HOXC6P09630 235 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 PTPREP23469 700 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 KLRC3Q07444 240 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 GRB14Q14449 540 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
PDE6D-204ENST00000477748 FAM83BQ5T0W9 1011 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
PDE6D-204ENST00000477748 MKL1Q969V6 931 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 NBPF3Q9H094 633 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 OGDHLQ9ULD0 1010 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 TACC3Q9Y6A5 838 aa16.73■□□□□ 0.27
PDE6D-204ENST00000477748 NDUFB10O96000 172 aa16.72■□□□□ 0.27
PDE6D-204ENST00000477748 CACNB2Q08289 660 aaPredicted RBP16.72■□□□□ 0.27
PDE6D-204ENST00000477748 PPP4R3BQ5MIZ7 849 aa16.72■□□□□ 0.27
PDE6D-204ENST00000477748 MFSD14CQ5VZR4 134 aa16.72■□□□□ 0.27
PDE6D-204ENST00000477748 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
PDE6D-204ENST00000477748 LRRC47Q8N1G4 583 aaKnown RBP16.72■□□□□ 0.27
PDE6D-204ENST00000477748 SHCBP1Q8NEM2 672 aa16.72■□□□□ 0.27
PDE6D-204ENST00000477748 DIS3LQ8TF46 1054 aaKnown RBP16.72■□□□□ 0.27
PDE6D-204ENST00000477748 ATG4CQ96DT6 458 aa16.72■□□□□ 0.27
PDE6D-204ENST00000477748 SPATC1LQ9H0A9 340 aa16.72■□□□□ 0.27
PDE6D-204ENST00000477748 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
PDE6D-204ENST00000477748 A0A0G2JMZ2 1700 aa16.72■□□□□ 0.27
PDE6D-204ENST00000477748 COL11A1P12107 1806 aaPredicted RBP16.71■□□□□ 0.27
PDE6D-204ENST00000477748 ZNF213O14771 459 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 STRNO43815 780 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 FGRP09769 529 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 PLS1Q14651 629 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 CCL14Q16627 93 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 NUP88Q99567 741 aaPredicted RBP16.71■□□□□ 0.27
PDE6D-204ENST00000477748 DSCC1Q9BVC3 393 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 MOV10L1Q9BXT6 1211 aaKnown RBP16.71■□□□□ 0.27
PDE6D-204ENST00000477748 FBXO28Q9NVF7 368 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 SYNPO2Q9UMS6 1093 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 STX8Q9UNK0 236 aa16.71■□□□□ 0.27
PDE6D-204ENST00000477748 LAMA4Q16363 1823 aa16.7■□□□□ 0.26
PDE6D-204ENST00000477748 AKNAD1Q5T1N1 836 aa16.7■□□□□ 0.26
PDE6D-204ENST00000477748 SLC17A8Q8NDX2 589 aa16.7■□□□□ 0.26
PDE6D-204ENST00000477748 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
PDE6D-204ENST00000477748 MROH8Q9H579 483 aa16.7■□□□□ 0.26
PDE6D-204ENST00000477748 C11orf49Q9H6J7 331 aa16.7■□□□□ 0.26
PDE6D-204ENST00000477748 PPP1R9AQ9ULJ8 1098 aa16.7■□□□□ 0.26
PDE6D-204ENST00000477748 ZNF236Q9UL36 1845 aa16.7■□□□□ 0.26
PDE6D-204ENST00000477748 RAD50Q92878 1312 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms