RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 METTL24Q5JXM2 366 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 WDR93Q6P2C0 686 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 CLEC4GQ6UXB4 293 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 TTC6Q86TZ1 520 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 FAM228AQ86W67 206 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 KIRREL3Q8IZU9 778 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 SYNE4Q8N205 404 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 TM6SF1Q9BZW5 370 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 MED23Q9ULK4 1368 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 SPEF2Q9C093 1822 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 GOLGA6L4A6NEF3 574 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 RGL2O15211 777 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 CUTAO60888 179 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 CUL3Q13618 768 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 SKIDA1Q1XH10 827 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 TTC39AQ5SRH9 613 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 TSC22D3Q99576 134 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 UPF3BQ9BZI7 483 aaKnown RBP14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 CENPHQ9H3R5 247 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 UTP6Q9NYH9 597 aaKnown RBP14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 RIPOR2Q9Y4F9 1068 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 VWA3AA6NCI4 1184 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 LRRIQ3A6PVS8 624 aaPredicted RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 WDHD1O75717 1129 aaPredicted RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 ZNF24P17028 368 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 NAT1P18440 290 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 NECTIN1Q15223 517 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 CRELD2Q6UXH1 353 aaPredicted RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 FUKQ8N0W3 1084 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 KIFC2Q96AC6 838 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 EDC3Q96F86 508 aaKnown RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 PNKPQ96T60 521 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 MTMR6Q9Y217 621 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 NIP7Q9Y221 180 aaKnown RBP eCLIP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 RBM8AQ9Y5S9 174 aaKnown RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 CNTNAP4Q9C0A0 1308 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 B4DLN1 442 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 MGRN1O60291 552 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 RPSAP08865 295 aaKnown RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 PSMA5P28066 241 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 GJA8P48165 433 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 CCDC15Q0P6D6 951 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 MCMDC2Q4G0Z9 681 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 SUSD4Q5VX71 490 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 SPTY2D1Q68D10 685 aaPredicted RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 CUL5Q93034 780 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 GJD4Q96KN9 370 aaPredicted RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 HMG20BQ9P0W2 317 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 TPX2Q9ULW0 747 aaKnown RBP14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 SYNPO2Q9UMS6 1093 aa14.16□□□□□ -0.14
RTFDC1-207ENST00000477573 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 BIN1O00499 593 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 NDUFAB1O14561 156 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 PDHBP11177 359 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 GNG11P61952 73 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 RC3H1Q5TC82 1133 aaKnown RBP14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 FAM114A1Q8IWE2 563 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 DHX40Q8IX18 779 aaKnown RBP14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 CCHCR1Q8TD31 782 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 YIPF3Q9GZM5 350 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 ANO10Q9NW15 660 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 CYP46A1Q9Y6A2 500 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 SYNRGQ9UMZ2 1314 aa14.15□□□□□ -0.14
RTFDC1-207ENST00000477573 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 CCDC152Q4G0S7 254 aa14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 SFMBT2Q5VUG0 894 aa14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 CREB3L3Q68CJ9 461 aa14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 LINC00116Q8NCU8 138 aa14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 SMARCC2Q8TAQ2 1214 aa14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 SH3GL2Q99962 352 aa14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 UNC45AQ9H3U1 944 aa14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 HELLSQ9NRZ9 838 aa14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 DNAAF2Q9NVR5 837 aaKnown RBP14.15□□□□□ -0.15
RTFDC1-207ENST00000477573 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 A6NHS1 94 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 ARHGAP6O43182 974 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 E2F6O75461 281 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 LUC7L3O95232 432 aaKnown RBP14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 SKOR1P84550 965 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 DPY19L2Q6NUT2 758 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 TMC6Q7Z403 805 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 RASSF8Q8NHQ8 419 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 DHX58Q96C10 678 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 SCLT1Q96NL6 688 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 SUGCTQ9HAC7 445 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 NHSQ6T4R5 1651 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 AFF2P51816 1311 aa14.14□□□□□ -0.15
RTFDC1-207ENST00000477573 ATP6V1G1O75348 118 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 TAF5LO75529 589 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 HSPA1LP34931 641 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 DYNC1I2Q13409 638 aaKnown RBP14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 BLMHQ13867 455 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 CEP57L1Q8IYX8 460 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 HDAC7Q8WUI4 952 aa14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 JAKMIP1Q96N16 626 aaKnown RBP14.13□□□□□ -0.15
RTFDC1-207ENST00000477573 TMEM165Q9HC07 324 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms