RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 EHD4Q9H223 541 aa7.71□□□□□ -1.18
LDB3-206ENST00000477489 DHX36Q9H2U1 1008 aaKnown RBP7.71□□□□□ -1.18
LDB3-206ENST00000477489 MKNK2Q9HBH9 465 aa7.71□□□□□ -1.18
LDB3-206ENST00000477489 SH3GLB2Q9NR46 395 aa7.71□□□□□ -1.18
LDB3-206ENST00000477489 TACC3Q9Y6A5 838 aa7.71□□□□□ -1.18
LDB3-206ENST00000477489 FLT1P17948 1338 aa7.71□□□□□ -1.18
LDB3-206ENST00000477489 TESPA1A2RU30 521 aaPredicted RBP7.7□□□□□ -1.18
LDB3-206ENST00000477489 hCG_1984214I3L0E3 225 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 GADD45BO75293 160 aaPredicted RBP7.7□□□□□ -1.18
LDB3-206ENST00000477489 TOMM70O94826 608 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 MMP1P03956 469 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 POLR3DP05423 398 aaPredicted RBP7.7□□□□□ -1.18
LDB3-206ENST00000477489 CDC27P30260 824 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 TGFB2P61812 414 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 DIXDC1Q155Q3 683 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 CCDC93Q567U6 631 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 KRT40Q6A162 431 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 ADALQ6DHV7 355 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 GALNT17Q6IS24 598 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 RBM43Q6ZSC3 357 aaKnown RBP7.7□□□□□ -1.18
LDB3-206ENST00000477489 TMTC3Q6ZXV5 915 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 ZNF713Q8N859 430 aaPredicted RBP7.7□□□□□ -1.18
LDB3-206ENST00000477489 NEDD1Q8NHV4 660 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 RBM46Q8TBY0 533 aaKnown RBP7.7□□□□□ -1.18
LDB3-206ENST00000477489 MTRQ99707 1265 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 NUP62CLQ9H1M0 184 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 TSPY26PQ9H489 355 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 KAT14Q9H8E8 782 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 BRMS1Q9HCU9 246 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.7□□□□□ -1.18
LDB3-206ENST00000477489 SERPINA10Q9UK55 444 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 DAGLAQ9Y4D2 1042 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 ADGRG1Q9Y653 693 aa7.7□□□□□ -1.18
LDB3-206ENST00000477489 GREB1LQ9C091 1923 aaPredicted RBP7.7□□□□□ -1.18
LDB3-206ENST00000477489 FAM237AA0A1B0GTK4 181 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 USP17L3A6NCW0 530 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 USP17L4A6NCW7 530 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 HLA-DOAP06340 250 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 USP17L8P0C7I0 530 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 TSPY3P0CV98 308 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 TSPY8P0CW00 308 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 XRCC6P12956 609 aaKnown RBP eCLIP7.69□□□□□ -1.18
LDB3-206ENST00000477489 CALML3P27482 149 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 TRAPPC10P48553 1259 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 TFAP4Q01664 338 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 GABPAQ06546 454 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 CCDC173Q0VFZ6 552 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 FUT2Q10981 343 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 GNL2Q13823 731 aaKnown RBP7.69□□□□□ -1.18
LDB3-206ENST00000477489 GRM4Q14833 912 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 SLC39A14Q15043 492 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 STK38Q15208 465 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 MAP3K11Q16584 847 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 ANO1Q5XXA6 986 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 CCDC73Q6ZRK6 1079 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 USP17L1Q7RTZ2 530 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 TEX2Q8IWB9 1127 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 ELOA2Q8IYF1 753 aaPredicted RBP7.69□□□□□ -1.18
LDB3-206ENST00000477489 TTLL6Q8N841 843 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 LINC00301Q8NCQ3 95 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 TGFBRAP1Q8WUH2 860 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 NUP133Q8WUM0 1156 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 CCDC17Q96LX7 622 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 USP28Q96RU2 1077 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 IDI2Q9BXS1 227 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 SLC26A6Q9BXS9 759 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 CLSTN2Q9H4D0 955 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 IL21Q9HBE4 155 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 GDPD2Q9HCC8 539 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 SYNPO2Q9UMS6 1093 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 TTF2Q9UNY4 1162 aaKnown RBP7.69□□□□□ -1.18
LDB3-206ENST00000477489 CEP131Q9UPN4 1083 aa7.69□□□□□ -1.18
LDB3-206ENST00000477489 SYCE3A1L190 88 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 SPTLC2O15270 562 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 ECE2O60344 883 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 CCDC192P0DO97 292 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 TOP1P11387 765 aaKnown RBP7.68□□□□□ -1.18
LDB3-206ENST00000477489 DNAJB2P25686 324 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 CDK8P49336 464 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 FAM160A1Q05DH4 1040 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 HS1BP3Q53T59 392 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 DACT2Q5SW24 774 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 RCSD1Q6JBY9 416 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 NOSTRINQ8IVI9 506 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 MAPKAPK5Q8IW41 473 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 CCDC148Q8NFR7 591 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 NKX2-3Q8TAU0 364 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 BICD2Q8TD16 824 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 MRPS27Q92552 414 aaKnown RBP7.68□□□□□ -1.18
LDB3-206ENST00000477489 TIGD1Q96MW7 591 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 GPR101Q96P66 508 aaPredicted RBP7.68□□□□□ -1.18
LDB3-206ENST00000477489 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.68□□□□□ -1.18
LDB3-206ENST00000477489 OSBPL5Q9H0X9 879 aaPredicted RBP7.68□□□□□ -1.18
LDB3-206ENST00000477489 SENP2Q9HC62 589 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 ATRNL1Q5VV63 1379 aa7.68□□□□□ -1.18
LDB3-206ENST00000477489 BRCA1P38398 1863 aaKnown RBP7.68□□□□□ -1.18
LDB3-206ENST00000477489 CYP2D7A0A087X1C5 515 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 KINO60870 393 aaKnown RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 ENTPD3O75355 529 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 PRDM1O75626 825 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms