RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 ADAMTS5Q9UNA0 930 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 ROBO3Q96MS0 1386 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 GSG1L2A8MUP6 293 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 SEPT4O43236 478 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 FCER1AP12319 257 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 RASA1P20936 1047 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 LRIT3Q3SXY7 679 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 MAML3Q96JK9 1138 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 UBE2OQ9C0C9 1292 aaKnown RBP13.62□□□□□ -0.23
HDLBP-236ENST00000477477 PPP1R9AQ9ULJ8 1098 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 MYH7P12883 1935 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 MYH8P13535 1937 aa13.62□□□□□ -0.23
HDLBP-236ENST00000477477 VWA5AO00534 786 aa13.61□□□□□ -0.23
HDLBP-236ENST00000477477 RNF113AO15541 343 aaKnown RBP13.61□□□□□ -0.23
HDLBP-236ENST00000477477 RAD21O60216 631 aa13.61□□□□□ -0.23
HDLBP-236ENST00000477477 ZFYP08048 801 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-236ENST00000477477 FAM83BQ5T0W9 1011 aa13.61□□□□□ -0.23
HDLBP-236ENST00000477477 ANO1Q5XXA6 986 aa13.61□□□□□ -0.23
HDLBP-236ENST00000477477 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
HDLBP-236ENST00000477477 RIOX2Q8IUF8 465 aa13.61□□□□□ -0.23
HDLBP-236ENST00000477477 REPS2Q8NFH8 660 aa13.61□□□□□ -0.23
HDLBP-236ENST00000477477 MMP19Q99542 508 aa13.61□□□□□ -0.23
HDLBP-236ENST00000477477 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-236ENST00000477477 ZNF214Q9UL59 606 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-236ENST00000477477 MINDY4BA8MYZ0 360 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 GPAA1O43292 621 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 STAT3P40763 770 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-236ENST00000477477 MDM2Q00987 491 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-236ENST00000477477 GJC2Q5T442 439 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-236ENST00000477477 DNAH12Q6ZR08 3092 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 STK11IPQ8N1F8 1099 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 ARRDC4Q8NCT1 418 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 MKNK2Q9HBH9 465 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 NYAP2Q9P242 653 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 PARP14Q460N5 1801 aa13.6□□□□□ -0.23
HDLBP-236ENST00000477477 GREB1LQ9C091 1923 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-236ENST00000477477 KBTBD13C9JR72 458 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 M0R2C6 588 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 GNAT2P19087 354 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 COPB2P35606 906 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 TDO2P48775 406 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 RTP1P59025 263 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 KCTD2Q14681 263 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 FAM47AQ5JRC9 791 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 PRAMEF19Q5SWL8 479 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 NUP88Q99567 741 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-236ENST00000477477 SLF1Q9BQI6 1058 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 NRBP1Q9UHY1 535 aa13.59□□□□□ -0.23
HDLBP-236ENST00000477477 IGKV6D-41A0A0C4DH26 115 aa13.58□□□□□ -0.24
HDLBP-236ENST00000477477 F5H6K3 240 aa13.58□□□□□ -0.24
HDLBP-236ENST00000477477 NDUFB10O96000 172 aa13.58□□□□□ -0.24
HDLBP-236ENST00000477477 PGK2P07205 417 aa13.58□□□□□ -0.24
HDLBP-236ENST00000477477 KLRC3Q07444 240 aa13.58□□□□□ -0.24
HDLBP-236ENST00000477477 LRRFIP1Q32MZ4 808 aaKnown RBP13.58□□□□□ -0.24
HDLBP-236ENST00000477477 ZNF792Q3KQV3 632 aa13.58□□□□□ -0.24
HDLBP-236ENST00000477477 TEX13BQ9BXU2 312 aa13.58□□□□□ -0.24
HDLBP-236ENST00000477477 DIS3Q9Y2L1 958 aaKnown RBP13.58□□□□□ -0.24
HDLBP-236ENST00000477477 TTC41PQ6P2S7 1318 aa13.58□□□□□ -0.24
HDLBP-236ENST00000477477 ERC2O15083 957 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 MYCNP04198 464 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-236ENST00000477477 LRRC41Q15345 812 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 SLC39A5Q6ZMH5 540 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 DEFB123Q8N688 67 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 LBHD1Q9BQE6 289 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-236ENST00000477477 TINF2Q9BSI4 451 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 ZNF287Q9HBT7 754 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 PRKAG2Q9UGJ0 569 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 SYNPO2Q9UMS6 1093 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 ATP11BQ9Y2G3 1177 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
HDLBP-236ENST00000477477 COL6A3P12111 3177 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 PATL2C9JE40 543 aaKnown RBP13.56□□□□□ -0.24
HDLBP-236ENST00000477477 PRDM1O75626 825 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 APPP05067 770 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 RARBP10826 455 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 SNX17Q15036 470 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 SNRNP48Q6IEG0 339 aaKnown RBP13.56□□□□□ -0.24
HDLBP-236ENST00000477477 Q7L0L9 218 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 IFNL3Q8IZI9 196 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 ZNF444Q8N0Y2 327 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-236ENST00000477477 OTUD7AQ8TE49 926 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-236ENST00000477477 CEP95Q96GE4 821 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 XPNPEP3Q9NQH7 507 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 CLIP2Q9UDT6 1046 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 PLIN4Q96Q06 1357 aa13.56□□□□□ -0.24
HDLBP-236ENST00000477477 COL11A1P12107 1806 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-236ENST00000477477 ATP2A1O14983 1001 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 TAL1P17542 331 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-236ENST00000477477 ADCYAP1R1P41586 468 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 TRIM60Q495X7 471 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 PRPF38AQ8NAV1 312 aaKnown RBP13.55□□□□□ -0.24
HDLBP-236ENST00000477477 GMCL1P1Q8NEA9 526 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 MKL1Q969V6 931 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 SEC62Q99442 399 aaKnown RBP13.55□□□□□ -0.24
HDLBP-236ENST00000477477 FSD1Q9BTV5 496 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 NACAP1Q9BZK3 213 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 MTMR4Q9NYA4 1195 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 PHF24Q9UPV7 400 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms