RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 ALDH1A1P00352 501 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 PLA2G4AP47712 749 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 SCNN1BP51168 640 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 GABREP78334 506 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 MLLT1Q03111 559 aaPredicted RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 SMAD4Q13485 552 aaKnown RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 VPS53Q5VIR6 699 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 MTMR14Q8NCE2 650 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 PRIMPOLQ96LW4 560 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 MOGAT1Q96PD6 335 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 NTPCRQ9BSD7 190 aaKnown RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 ZC3H7BQ9UGR2 993 aaKnown RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 PCDHGB3Q9Y5G1 929 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 HNRNPCP07910 306 aaKnown RBP eCLIP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 SMPD1P17405 629 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 MSNP26038 577 aaKnown RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 CASP2P42575 452 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 CNGA3Q16281 694 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 CCDC152Q4G0S7 254 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 GPATCH4Q5T3I0 446 aaKnown RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 PPP2R2DQ66LE6 453 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 IL31Q6EBC2 164 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 BTN2A1Q7KYR7 527 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 ESX1Q8N693 406 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 EPS8L3Q8TE67 593 aaKnown RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 PIBF1Q8WXW3 757 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 CEP95Q96GE4 821 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 FNBP1Q96RU3 617 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 DISC1Q9NRI5 854 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 PGAP2Q9UHJ9 254 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 SYNDIG1LA6NDD5 238 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 SOWAHDA6NJG2 315 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 LSM1O15116 133 aaKnown RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 PRPF40AO75400 957 aaKnown RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 STAM2O75886 525 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 ZSCAN22P10073 491 aaPredicted RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 RPL13P26373 211 aaKnown RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 TMOD1P28289 359 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 NEK3P51956 506 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 TNNI3KQ59H18 835 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 MUM1L1Q5H9M0 696 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 HYIQ5T013 277 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 NANOGNBQ7Z5D8 188 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 SDCCAG8Q86SQ7 713 aaPredicted RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 NBPF15Q8N660 670 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 B4GALNT2Q8NHY0 566 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 ARHGEF2Q92974 986 aaKnown RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 CLMNQ96JQ2 1002 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 DESI2Q9BSY9 194 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 GLT8D2Q9H1C3 349 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 C12orf49Q9H741 205 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 SYNCQ9H7C4 482 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 FBXO2Q9UK22 296 aaPredicted RBP6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 FBXO10Q9UK96 956 aa6.74□□□□□ -1.33
SPTLC3-205ENST00000476791 SERPINB3P29508 390 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 CYP2C19P33261 490 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 SLC16A2P36021 539 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 TUFMP49411 452 aaKnown RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 PDE3BQ13370 1112 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 AGERQ15109 404 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 TAF7Q15545 349 aaPredicted RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 FAM173BQ6P4H8 233 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 GBP7Q8N8V2 638 aaPredicted RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 USP38Q8NB14 1042 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 FAM76AQ8TAV0 307 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 STK32AQ8WU08 396 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 FOXJ1Q92949 421 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 TTPALQ9BTX7 342 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 KCTD10Q9H3F6 313 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 RABEP2Q9H5N1 569 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 ZCCHC17Q9NP64 241 aaKnown RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 NLRP2Q9NX02 1062 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 SEPT10Q9P0V9 454 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 STK39Q9UEW8 545 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 STAP2Q9UGK3 403 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 LAMP5Q9UJQ1 280 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 TRIM17Q9Y577 477 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 TLL2Q9Y6L7 1015 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 ERCC6Q03468 1493 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 KRBA1A5PL33 1030 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 SIAH2O43255 324 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 PPP1R12BO60237 982 aaPredicted RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 CLASP2O75122 1294 aaKnown RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 TCEA3O75764 348 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 HCLS1P14317 486 aaPredicted RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 CD86P42081 329 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 MTHFRP42898 656 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 AP2B1P63010 937 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 MRPL58Q14197 206 aaKnown RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 CRY1Q16526 586 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 PROSER3Q2NL68 480 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 FAM133BQ5BKY9 247 aaKnown RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 CCDC122Q5T0U0 273 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 RNF20Q5VTR2 975 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 POMZP3Q6PJE2 187 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 BEND5Q7L4P6 421 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 CARNMT1Q8N4J0 409 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 CTNNBL1Q8WYA6 563 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms