RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 RCSD1Q6JBY9 416 aa24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 FBXO46Q6PJ61 603 aaPredicted RBP24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 SAMD1Q6SPF0 538 aaPredicted RBP24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 TTC14Q96N46 770 aa24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 TMEM47Q9BQJ4 181 aa24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 BTBD7Q9P203 1132 aa24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 PTPN22Q9Y2R2 807 aa24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 E7EWF7 191 aa24.72■■□□□ 1.55
MAP1LC3A-204ENST00000476428 TOP1P11387 765 aaKnown RBP24.72■■□□□ 1.55
MAP1LC3A-204ENST00000476428 NECTIN1Q15223 517 aa24.72■■□□□ 1.55
MAP1LC3A-204ENST00000476428 PRPF38BQ5VTL8 546 aaKnown RBP24.72■■□□□ 1.55
MAP1LC3A-204ENST00000476428 STOX1Q6ZVD7 989 aa24.72■■□□□ 1.55
MAP1LC3A-204ENST00000476428 ATG4CQ96DT6 458 aa24.72■■□□□ 1.55
MAP1LC3A-204ENST00000476428 MYPNQ86TC9 1320 aa24.71■■□□□ 1.55
MAP1LC3A-204ENST00000476428 SLC27A2O14975 620 aa24.71■■□□□ 1.55
MAP1LC3A-204ENST00000476428 MCCP23508 829 aa24.71■■□□□ 1.55
MAP1LC3A-204ENST00000476428 HOXD10P28358 340 aa24.71■■□□□ 1.55
MAP1LC3A-204ENST00000476428 TRDNQ13061 729 aa24.71■■□□□ 1.55
MAP1LC3A-204ENST00000476428 IQCA1Q86XH1 822 aa24.71■■□□□ 1.55
MAP1LC3A-204ENST00000476428 CHMP4CQ96CF2 233 aa24.71■■□□□ 1.55
MAP1LC3A-204ENST00000476428 SRRDQ9UH36 339 aa24.71■■□□□ 1.55
MAP1LC3A-204ENST00000476428 BMP3P12645 472 aa24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 CCDC178Q5BJE1 867 aa24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 CREB3L3Q68CJ9 461 aa24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 CYB5R4Q7L1T6 521 aa24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 DGKHQ86XP1 1220 aa24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 GMCL1Q96IK5 515 aa24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 ZSCAN10Q96SZ4 725 aaPredicted RBP24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 PPP1R9AQ9ULJ8 1098 aa24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 ADAMTS5Q9UNA0 930 aa24.7■■□□□ 1.54
MAP1LC3A-204ENST00000476428 TNPO2O14787 897 aaKnown RBP24.69■■□□□ 1.54
MAP1LC3A-204ENST00000476428 SLC1A4P43007 532 aa24.69■■□□□ 1.54
MAP1LC3A-204ENST00000476428 MB21D1Q8N884 522 aa24.69■■□□□ 1.54
MAP1LC3A-204ENST00000476428 ANKS1AQ92625 1134 aa24.69■■□□□ 1.54
MAP1LC3A-204ENST00000476428 SLF1Q9BQI6 1058 aa24.69■■□□□ 1.54
MAP1LC3A-204ENST00000476428 PORCNQ9H237 461 aa24.69■■□□□ 1.54
MAP1LC3A-204ENST00000476428 MTMR7Q9Y216 660 aa24.69■■□□□ 1.54
MAP1LC3A-204ENST00000476428 PRMT2P55345 433 aa24.68■■□□□ 1.54
MAP1LC3A-204ENST00000476428 RASGRP2Q7LDG7 609 aa24.68■■□□□ 1.54
MAP1LC3A-204ENST00000476428 NCOA7Q8NI08 942 aa24.68■■□□□ 1.54
MAP1LC3A-204ENST00000476428 FEM1BQ9UK73 627 aa24.68■■□□□ 1.54
MAP1LC3A-204ENST00000476428 GABRQQ9UN88 632 aa24.68■■□□□ 1.54
MAP1LC3A-204ENST00000476428 HPS5Q9UPZ3 1129 aa24.68■■□□□ 1.54
MAP1LC3A-204ENST00000476428 PTCH2Q9Y6C5 1203 aa24.68■■□□□ 1.54
MAP1LC3A-204ENST00000476428 LAMA4Q16363 1823 aa24.68■■□□□ 1.54
MAP1LC3A-204ENST00000476428 TMEM232C9JQI7 657 aa24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 CCNA1P78396 465 aa24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 PRKCZQ05513 592 aa24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 RALYLQ86SE5 291 aaKnown RBP24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 ENAHQ8N8S7 591 aaPredicted RBP24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 PRPF38AQ8NAV1 312 aaKnown RBP24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 COA7Q96BR5 231 aa24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 UBAC1Q9BSL1 405 aa24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 ISY1Q9ULR0 285 aaKnown RBP24.67■■□□□ 1.54
MAP1LC3A-204ENST00000476428 TNKSO95271 1327 aa24.66■■□□□ 1.54
MAP1LC3A-204ENST00000476428 VWA5AO00534 786 aa24.66■■□□□ 1.54
MAP1LC3A-204ENST00000476428 MAPK4P31152 587 aa24.66■■□□□ 1.54
MAP1LC3A-204ENST00000476428 KCTD1Q719H9 257 aa24.66■■□□□ 1.54
MAP1LC3A-204ENST00000476428 CCAR1Q8IX12 1150 aaKnown RBP24.66■■□□□ 1.54
MAP1LC3A-204ENST00000476428 DCAF4Q8WV16 495 aa24.66■■□□□ 1.54
MAP1LC3A-204ENST00000476428 TMEM132BQ14DG7 1078 aa24.65■■□□□ 1.54
MAP1LC3A-204ENST00000476428 MB21D2Q8IYB1 491 aaPredicted RBP24.65■■□□□ 1.54
MAP1LC3A-204ENST00000476428 REPS2Q8NFH8 660 aa24.65■■□□□ 1.54
MAP1LC3A-204ENST00000476428 KIFC2Q96AC6 838 aa24.65■■□□□ 1.54
MAP1LC3A-204ENST00000476428 MOV10L1Q9BXT6 1211 aaKnown RBP24.65■■□□□ 1.54
MAP1LC3A-204ENST00000476428 SPATC1LQ9H0A9 340 aa24.65■■□□□ 1.54
MAP1LC3A-204ENST00000476428 GJD2Q9UKL4 321 aa24.65■■□□□ 1.54
MAP1LC3A-204ENST00000476428 ZSWIM8A7E2V4 1837 aa24.65■■□□□ 1.54
MAP1LC3A-204ENST00000476428 FLT3LGP49771 235 aa24.64■■□□□ 1.54
MAP1LC3A-204ENST00000476428 PLS1Q14651 629 aa24.64■■□□□ 1.54
MAP1LC3A-204ENST00000476428 SEC23AQ15436 765 aa24.64■■□□□ 1.54
MAP1LC3A-204ENST00000476428 RNF20Q5VTR2 975 aa24.64■■□□□ 1.54
MAP1LC3A-204ENST00000476428 CHURC1Q8WUH1 139 aa24.64■■□□□ 1.54
MAP1LC3A-204ENST00000476428 KAT14Q9H8E8 782 aa24.64■■□□□ 1.54
MAP1LC3A-204ENST00000476428 PLA2G6O60733 806 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 PDHBP11177 359 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 ANTXR2P58335 489 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 CCDC96Q2M329 555 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 CHST3Q7LGC8 479 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 GPR142Q7Z601 462 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 PLEKHH3Q7Z736 793 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 FAM160B2Q86V87 743 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 RAET1EQ8TD07 263 aa24.63■■□□□ 1.53
MAP1LC3A-204ENST00000476428 IFIT3O14879 490 aaKnown RBP24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 ZBED4O75132 1171 aa24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 REC8O95072 547 aa24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SNHG28P0DPA3 235 aa24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 STAT2P52630 851 aa24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 IFIT1BQ5T764 474 aaKnown RBP24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 TTBK2Q6IQ55 1244 aa24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 RASEFQ8IZ41 740 aa24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 PNMA1Q8ND90 353 aa24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 GPCPD1Q9NPB8 672 aa24.62■■□□□ 1.53
MAP1LC3A-204ENST00000476428 RLFQ13129 1914 aa24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 MYH4Q9Y623 1939 aa24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 ERCC3P19447 782 aa24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 STAT3P40763 770 aa24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 IKQ13123 557 aaPredicted RBP24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 COL9A3Q14050 684 aaPredicted RBP24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 TSGA10IPQ3SY00 556 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms