RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	ATP2B2	Q01814	1243 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	DIXDC1	Q155Q3	683 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	RAB30	Q15771	203 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135		Q3C1V9	767 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	EPHA10	Q5JZY3	1008 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	RASIP1	Q5U651	963 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	G2E3	Q7L622	706 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	FAM160A2	Q8N612	972 aa	Predicted RBP	9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	TRPV1	Q8NER1	839 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	DNAAF4	Q8WXU2	420 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	HERVK_113	Q902F9	699 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	PUS3	Q9BZE2	481 aa	Known RBP	9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	KIF16B	Q96L93	1317 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	RFX7	Q2KHR2	1363 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	DDTL	A6NHG4	134 aa	Predicted RBP	9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	SLC15A5	A6NIM6	579 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	GRXCR1	A8MXD5	290 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	PEX10	O60683	326 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	IGHA2	P01877	340 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	SLURP2	P0DP57	97 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	CYBA	P13498	195 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	ZEB1	P37275	1124 aa	Predicted RBP	9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	FOXK2	Q01167	660 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	CALD1	Q05682	793 aa	Known RBP	9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	PKDCC	Q504Y2	493 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	CCDC174	Q6PII3	467 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	AS3MT	Q9HBK9	375 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	CWC22	Q9HCG8	908 aa	Known RBP	9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	MSRA	Q9UJ68	235 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	COG5	Q9UP83	839 aa		9.02	□□□□□ -0.97
HDAC9-223	ENST00000476135	DGAT1	O75907	488 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	PDE8B	O95263	885 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	CYP2C19	P33261	490 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	BACE1	P56817	501 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	LRRC41	Q15345	812 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	BRICD5	Q6PL45	260 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	TSPYL6	Q8N831	410 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	FERMT2	Q96AC1	680 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	WDR18	Q9BV38	432 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	TMEM39A	Q9NV64	488 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	TMOD4	Q9NZQ9	345 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	PHF24	Q9UPV7	400 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	FCF1	Q9Y324	198 aa	Known RBP	9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	SALL2	Q9Y467	1007 aa	Predicted RBP	9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	MYH2	Q9UKX2	1941 aa		9.01	□□□□□ -0.97
HDAC9-223	ENST00000476135	SEPT4	O43236	478 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	LDHB	P07195	334 aa	Known RBP	9	□□□□□ -0.97
HDAC9-223	ENST00000476135	CD46	P15529	392 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	PRDX5	P30044	214 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	CAP2	P40123	477 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	CCNA1	P78396	465 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	FLII	Q13045	1269 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	PPIG	Q13427	754 aa	Known RBP eCLIP	9	□□□□□ -0.97
HDAC9-223	ENST00000476135	METTL24	Q5JXM2	366 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	TMEM240	Q5SV17	173 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	ZNF787	Q6DD87	383 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	RNF19B	Q6ZMZ0	732 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	VGLL2	Q8N8G2	317 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	SLC44A5	Q8NCS7	719 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	TOX2	Q96NM4	488 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	SLC28A3	Q9HAS3	691 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	9	□□□□□ -0.97
HDAC9-223	ENST00000476135	PRDM9	Q9NQV7	894 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	CACNA1F	O60840	1977 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	GBF1	Q92538	1859 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	CHD7	Q9P2D1	2997 aa		9	□□□□□ -0.97
HDAC9-223	ENST00000476135	C19orf81	C9J6K1	198 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	TIMP1	P01033	207 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	IFIT1	P09914	478 aa	Known RBP	8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	POU3F3	P20264	500 aa	Predicted RBP	8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	RPIA	P49247	311 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	FAAP100	Q0VG06	881 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	FKBP5	Q13451	457 aa	Predicted RBP	8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	GRB14	Q14449	540 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	SKIV2L	Q15477	1246 aa	Known RBP	8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	TMEM132A	Q24JP5	1023 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	OLFML2B	Q68BL8	750 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	MFSD5	Q6N075	450 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	C16orf59	Q7L2K0	433 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	MICALL1	Q8N3F8	863 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	NPLOC4	Q8TAT6	608 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	FBXL18	Q96ME1	805 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	PAGR1	Q9BTK6	254 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	NKX2-4	Q9H2Z4	354 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	DDX4	Q9NQI0	724 aa	Known RBP	8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	RABGAP1	Q9Y3P9	1069 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	GAK	O14976	1311 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	SALL1	Q9NSC2	1324 aa		8.99	□□□□□ -0.97
HDAC9-223	ENST00000476135	FAM187A	A6NFU0	413 aa		8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	GRM8	O00222	908 aa		8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	PQBP1	O60828	265 aa	Known RBP	8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	FGFR2	P21802	821 aa		8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	MTMR2	Q13614	643 aa		8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	LRRC24	Q50LG9	513 aa		8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	BEND3	Q5T5X7	828 aa		8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	ANO1	Q5XXA6	986 aa		8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	PSRC1	Q6PGN9	363 aa	Predicted RBP	8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	ANKRD33	Q7Z3H0	272 aa		8.98	□□□□□ -0.97
HDAC9-223	ENST00000476135	PKD2L1	Q9P0L9	805 aa		8.98	□□□□□ -0.97

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