RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 CALM1P0DP23 149 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 CALM2P0DP24 149 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 CALM3P0DP25 149 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 PDCP20941 246 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 TNNI2P48788 182 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 METAP2P50579 478 aaKnown RBP eCLIP13.09□□□□□ -0.31
LSG1-207ENST00000475763 CACNB3P54284 484 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 TCP10Q12799 353 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 TNFAIP1Q13829 316 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
LSG1-207ENST00000475763 ZSCAN29Q8IWY8 852 aaPredicted RBP13.09□□□□□ -0.31
LSG1-207ENST00000475763 ZFPM1Q8IX07 1006 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 SLC44A5Q8NCS7 719 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 ZKSCAN3Q9BRR0 538 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 RNF181Q9P0P0 153 aa13.09□□□□□ -0.31
LSG1-207ENST00000475763 NAP1L2Q9ULW6 460 aaPredicted RBP13.09□□□□□ -0.31
LSG1-207ENST00000475763 GREB1LQ9C091 1923 aaPredicted RBP13.09□□□□□ -0.31
LSG1-207ENST00000475763 DDTLA6NHG4 134 aaPredicted RBP13.08□□□□□ -0.32
LSG1-207ENST00000475763 CDKL5O76039 1030 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 DDAH1O94760 285 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 GJB2P29033 226 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 NOVP48745 357 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 CCT2P78371 535 aaKnown RBP13.08□□□□□ -0.32
LSG1-207ENST00000475763 RAB3GAP1Q15042 981 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 SH3BP5LQ7L8J4 393 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 CATIPQ7Z7H3 387 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
LSG1-207ENST00000475763 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
LSG1-207ENST00000475763 MAP3K14Q99558 947 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 GPRC5DQ9NZD1 345 aa13.08□□□□□ -0.32
LSG1-207ENST00000475763 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
LSG1-207ENST00000475763 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 GOLGA8AA7E2F4 631 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 TCP10L2B9ZVM9 353 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 RNF223E7ERA6 249 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 CPLX1O14810 134 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 SHMT1P34896 483 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 LAPTM4AQ15012 233 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 GPR162Q16538 588 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 KIF4BQ2VIQ3 1234 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 TATDN1Q6P1N9 297 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 MICU3Q86XE3 530 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 RGS22Q8NE09 1264 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 VEZTQ9HBM0 779 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 IL17RBQ9NRM6 502 aa13.07□□□□□ -0.32
LSG1-207ENST00000475763 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
LSG1-207ENST00000475763 CTDNEP1O95476 244 aa13.06□□□□□ -0.32
LSG1-207ENST00000475763 TROAPQ12815 778 aa13.06□□□□□ -0.32
LSG1-207ENST00000475763 RTN1Q16799 776 aa13.06□□□□□ -0.32
LSG1-207ENST00000475763 GPIHBP1Q8IV16 184 aa13.06□□□□□ -0.32
LSG1-207ENST00000475763 CSRNP1Q96S65 589 aa13.06□□□□□ -0.32
LSG1-207ENST00000475763 KAT14Q9H8E8 782 aa13.06□□□□□ -0.32
LSG1-207ENST00000475763 NCOA5Q9HCD5 579 aaKnown RBP13.06□□□□□ -0.32
LSG1-207ENST00000475763 RBM28Q9NW13 759 aaKnown RBP13.06□□□□□ -0.32
LSG1-207ENST00000475763 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 SHTN1A0MZ66 631 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 LCE2BO14633 110 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 BRD1O95696 1058 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 SYT1P21579 422 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
LSG1-207ENST00000475763 TBC1D10BQ4KMP7 808 aaPredicted RBP13.05□□□□□ -0.32
LSG1-207ENST00000475763 APOBEC3FQ8IUX4 373 aaKnown RBP13.05□□□□□ -0.32
LSG1-207ENST00000475763 FAM184AQ8NB25 1140 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 FANCBQ8NB91 859 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 FAM217BQ9NTX9 383 aaPredicted RBP13.05□□□□□ -0.32
LSG1-207ENST00000475763 STK36Q9NRP7 1315 aa13.05□□□□□ -0.32
LSG1-207ENST00000475763 STX6O43752 255 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 NMT2O60551 498 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 JAK2O60674 1132 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 S1PR4O95977 384 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
LSG1-207ENST00000475763 AKR1B1P15121 316 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 IFNAR1P17181 557 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
LSG1-207ENST00000475763 MAP3K10Q02779 954 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 NTRK3Q16288 839 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 CERKLQ49MI3 558 aaPredicted RBP13.04□□□□□ -0.32
LSG1-207ENST00000475763 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
LSG1-207ENST00000475763 CLEC17AQ6ZS10 378 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 PNMA1Q8ND90 353 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 EMID1Q96A84 441 aaPredicted RBP13.04□□□□□ -0.32
LSG1-207ENST00000475763 CEP95Q96GE4 821 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.04□□□□□ -0.32
LSG1-207ENST00000475763 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 PGAP2Q9UHJ9 254 aa13.04□□□□□ -0.32
LSG1-207ENST00000475763 TTLL1O95922 423 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 EGFRP00533 1210 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms