RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 USP17L21D6R901 530 aa18.96■□□□□ 0.63
CDPF1-206ENST00000475605 PGK2P07205 417 aa18.96■□□□□ 0.63
CDPF1-206ENST00000475605 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
CDPF1-206ENST00000475605 ABRAQ8N0Z2 381 aa18.96■□□□□ 0.63
CDPF1-206ENST00000475605 BADQ92934 168 aa18.96■□□□□ 0.63
CDPF1-206ENST00000475605 CHMP4BQ9H444 224 aaKnown RBP18.96■□□□□ 0.63
CDPF1-206ENST00000475605 ATP8A2Q9NTI2 1148 aa18.96■□□□□ 0.63
CDPF1-206ENST00000475605 SLC5A4Q9NY91 659 aa18.96■□□□□ 0.63
CDPF1-206ENST00000475605 COL11A1P12107 1806 aaPredicted RBP18.95■□□□□ 0.62
CDPF1-206ENST00000475605 SMCHD1A6NHR9 2005 aa18.95■□□□□ 0.62
CDPF1-206ENST00000475605 WDR46O15213 610 aaKnown RBP18.95■□□□□ 0.62
CDPF1-206ENST00000475605 FCER1AP12319 257 aa18.95■□□□□ 0.62
CDPF1-206ENST00000475605 EEF2P13639 858 aaKnown RBP18.95■□□□□ 0.62
CDPF1-206ENST00000475605 SNX17Q15036 470 aa18.95■□□□□ 0.62
CDPF1-206ENST00000475605 SH2D4AQ9H788 454 aa18.95■□□□□ 0.62
CDPF1-206ENST00000475605 PDLIM7Q9NR12 457 aa18.95■□□□□ 0.62
CDPF1-206ENST00000475605 COG6Q9Y2V7 657 aa18.95■□□□□ 0.62
CDPF1-206ENST00000475605 TRIM43BA6NCK2 446 aa18.94■□□□□ 0.62
CDPF1-206ENST00000475605 TAL1P17542 331 aaPredicted RBP18.94■□□□□ 0.62
CDPF1-206ENST00000475605 ATP5JP18859 108 aa18.94■□□□□ 0.62
CDPF1-206ENST00000475605 C16orf86Q6ZW13 317 aa18.94■□□□□ 0.62
CDPF1-206ENST00000475605 TRIM43Q96BQ3 446 aaPredicted RBP18.94■□□□□ 0.62
CDPF1-206ENST00000475605 CCDC17Q96LX7 622 aa18.94■□□□□ 0.62
CDPF1-206ENST00000475605 MMP19Q99542 508 aa18.94■□□□□ 0.62
CDPF1-206ENST00000475605 COL25A1Q9BXS0 654 aaPredicted RBP18.94■□□□□ 0.62
CDPF1-206ENST00000475605 ADAMTS5Q9UNA0 930 aa18.94■□□□□ 0.62
CDPF1-206ENST00000475605 A0A0C4DFX4 3053 aa18.94■□□□□ 0.62
CDPF1-206ENST00000475605 RAB11FIP3O75154 756 aa18.93■□□□□ 0.62
CDPF1-206ENST00000475605 ZNF697Q5TEC3 545 aa18.93■□□□□ 0.62
CDPF1-206ENST00000475605 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.93■□□□□ 0.62
CDPF1-206ENST00000475605 HAUS7Q99871 368 aa18.93■□□□□ 0.62
CDPF1-206ENST00000475605 ZBTB40Q9NUA8 1239 aa18.93■□□□□ 0.62
CDPF1-206ENST00000475605 CUL9Q8IWT3 2517 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 HMMRO75330 724 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 SLC25A27O95847 323 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 PGK1P00558 417 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 ITGB8P26012 769 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 TLE2Q04725 743 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 CTR9Q6PD62 1173 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 RIOX2Q8IUF8 465 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 PUS7LQ9H0K6 701 aaKnown RBP18.92■□□□□ 0.62
CDPF1-206ENST00000475605 XPNPEP3Q9NQH7 507 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 DDX19BQ9UMR2 479 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
CDPF1-206ENST00000475605 VWA5AO00534 786 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 RAD21O60216 631 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 STAT3P40763 770 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 ZNF792Q3KQV3 632 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 FAM83BQ5T0W9 1011 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 C1orf53Q5VUE5 145 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 LENG1Q96BZ8 264 aaPredicted RBP18.91■□□□□ 0.62
CDPF1-206ENST00000475605 CDX2Q99626 313 aaPredicted RBP18.91■□□□□ 0.62
CDPF1-206ENST00000475605 TINF2Q9BSI4 451 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDPF1-206ENST00000475605 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDPF1-206ENST00000475605 KANSL2Q9H9L4 492 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 PHF24Q9UPV7 400 aa18.91■□□□□ 0.62
CDPF1-206ENST00000475605 PLXNA1Q9UIW2 1896 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 RARBP10826 455 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 KCTD2Q14681 263 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 UBE3CQ15386 1083 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 AMOTL1Q8IY63 956 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 STK11IPQ8N1F8 1099 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 REPS2Q8NFH8 660 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 NUP88Q99567 741 aaPredicted RBP18.9■□□□□ 0.62
CDPF1-206ENST00000475605 SEMA6BQ9H3T3 888 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 ZNF214Q9UL59 606 aaPredicted RBP18.9■□□□□ 0.62
CDPF1-206ENST00000475605 PPP1R9AQ9ULJ8 1098 aa18.9■□□□□ 0.62
CDPF1-206ENST00000475605 ZNF865P0CJ78 1059 aaPredicted RBP18.89■□□□□ 0.61
CDPF1-206ENST00000475605 EPHB4P54760 987 aa18.89■□□□□ 0.61
CDPF1-206ENST00000475605 TTYH1Q9H313 450 aaPredicted RBP18.89■□□□□ 0.61
CDPF1-206ENST00000475605 GOPCQ9HD26 462 aa18.89■□□□□ 0.61
CDPF1-206ENST00000475605 NRBP1Q9UHY1 535 aa18.89■□□□□ 0.61
CDPF1-206ENST00000475605 MYH7P12883 1935 aa18.89■□□□□ 0.61
CDPF1-206ENST00000475605 UNC80Q8N2C7 3258 aa18.88■□□□□ 0.61
CDPF1-206ENST00000475605 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
CDPF1-206ENST00000475605 DDRGK1Q96HY6 314 aa18.88■□□□□ 0.61
CDPF1-206ENST00000475605 DIS3Q9Y2L1 958 aaKnown RBP18.88■□□□□ 0.61
CDPF1-206ENST00000475605 A0A1W2PQ45 241 aaPredicted RBP18.87■□□□□ 0.61
CDPF1-206ENST00000475605 A0A1W2PQY0 241 aa18.87■□□□□ 0.61
CDPF1-206ENST00000475605 CLTBP09497 229 aa18.87■□□□□ 0.61
CDPF1-206ENST00000475605 RNF180Q86T96 592 aa18.87■□□□□ 0.61
CDPF1-206ENST00000475605 MYLIPQ8WY64 445 aa18.87■□□□□ 0.61
CDPF1-206ENST00000475605 RIPK3Q9Y572 518 aa18.87■□□□□ 0.61
CDPF1-206ENST00000475605 TACC3Q9Y6A5 838 aa18.87■□□□□ 0.61
CDPF1-206ENST00000475605 LAMA2P24043 3122 aaKnown RBP18.86■□□□□ 0.61
CDPF1-206ENST00000475605 PQBP1O60828 265 aaKnown RBP18.86■□□□□ 0.61
CDPF1-206ENST00000475605 ADAMTS4O75173 837 aa18.86■□□□□ 0.61
CDPF1-206ENST00000475605 SMAD3P84022 425 aaKnown RBP18.86■□□□□ 0.61
CDPF1-206ENST00000475605 STRBPQ96SI9 672 aaKnown RBP18.86■□□□□ 0.61
CDPF1-206ENST00000475605 ARPP21Q9UBL0 812 aaPredicted RBP18.86■□□□□ 0.61
CDPF1-206ENST00000475605 GREB1LQ9C091 1923 aaPredicted RBP18.86■□□□□ 0.61
CDPF1-206ENST00000475605 SNAI1O95863 264 aaPredicted RBP18.85■□□□□ 0.61
CDPF1-206ENST00000475605 AKR1A1P14550 325 aa18.85■□□□□ 0.61
CDPF1-206ENST00000475605 RASA1P20936 1047 aa18.85■□□□□ 0.61
CDPF1-206ENST00000475605 SLC4A3P48751 1232 aa18.85■□□□□ 0.61
CDPF1-206ENST00000475605 IRX5P78411 483 aaPredicted RBP18.85■□□□□ 0.61
CDPF1-206ENST00000475605 SNRNP48Q6IEG0 339 aaKnown RBP18.85■□□□□ 0.61
CDPF1-206ENST00000475605 ZSCAN25Q6NSZ9 544 aa18.85■□□□□ 0.61
CDPF1-206ENST00000475605 MAFAQ8NHW3 353 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms