RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PCDHB12Q9Y5F1 795 aa10.36□□□□□ -0.75
SMC5-203ENST00000475540 SSBP05455 408 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMC5-203ENST00000475540 SNW1Q13573 536 aaKnown RBP10.35□□□□□ -0.75
SMC5-203ENST00000475540 PPP2R5EQ16537 467 aa10.35□□□□□ -0.75
SMC5-203ENST00000475540 TMC3Q7Z5M5 1100 aa10.35□□□□□ -0.75
SMC5-203ENST00000475540 C19orf47Q8N9M1 422 aaKnown RBP10.35□□□□□ -0.75
SMC5-203ENST00000475540 SLAMF8Q9P0V8 285 aa10.35□□□□□ -0.75
SMC5-203ENST00000475540 C9IYK1 514 aa10.34□□□□□ -0.75
SMC5-203ENST00000475540 JUNBP17275 347 aaPredicted RBP10.34□□□□□ -0.75
SMC5-203ENST00000475540 C7orf61Q8IZ16 206 aa10.34□□□□□ -0.75
SMC5-203ENST00000475540 ZNF655Q8N720 491 aaPredicted RBP10.34□□□□□ -0.75
SMC5-203ENST00000475540 ANAPC16Q96DE5 110 aa10.34□□□□□ -0.75
SMC5-203ENST00000475540 HDAC8Q9BY41 377 aa10.34□□□□□ -0.75
SMC5-203ENST00000475540 ZNF214Q9UL59 606 aaPredicted RBP10.34□□□□□ -0.75
SMC5-203ENST00000475540 PCDHA11Q9Y5I1 949 aa10.34□□□□□ -0.75
SMC5-203ENST00000475540 A0A1W2PQH9 124 aa10.33□□□□□ -0.76
SMC5-203ENST00000475540 SSU72P8A0A1W2PR75 194 aa10.33□□□□□ -0.76
SMC5-203ENST00000475540 SIGLEC6O43699 453 aa10.33□□□□□ -0.76
SMC5-203ENST00000475540 TP53P04637 393 aaPredicted RBP10.33□□□□□ -0.76
SMC5-203ENST00000475540 ARID5AQ03989 594 aa10.33□□□□□ -0.76
SMC5-203ENST00000475540 TDRD10Q5VZ19 366 aaKnown RBP10.33□□□□□ -0.76
SMC5-203ENST00000475540 KRTAP1-3Q8IUG1 177 aa10.33□□□□□ -0.76
SMC5-203ENST00000475540 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMC5-203ENST00000475540 LTBP3Q9NS15 1303 aa10.33□□□□□ -0.76
SMC5-203ENST00000475540 PRAMEF1O95521 474 aa10.32□□□□□ -0.76
SMC5-203ENST00000475540 CASP7P55210 303 aa10.32□□□□□ -0.76
SMC5-203ENST00000475540 ANKRD39Q53RE8 183 aa10.32□□□□□ -0.76
SMC5-203ENST00000475540 TCTN2Q96GX1 697 aa10.32□□□□□ -0.76
SMC5-203ENST00000475540 TINF2Q9BSI4 451 aa10.32□□□□□ -0.76
SMC5-203ENST00000475540 PHAXQ9H814 394 aaKnown RBP10.32□□□□□ -0.76
SMC5-203ENST00000475540 CHST7Q9NS84 486 aa10.32□□□□□ -0.76
SMC5-203ENST00000475540 CTNND2Q9UQB3 1225 aa10.32□□□□□ -0.76
SMC5-203ENST00000475540 DNAJC25-GNG10A0A024R161 153 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 ITGB5P18084 799 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 GDNFP39905 211 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 AFMP43652 599 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 GNPTABQ3T906 1256 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 USHBP1Q8N6Y0 703 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 SLC43A3Q8NBI5 491 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 ASIC4Q96FT7 647 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 ADAMTS10Q9H324 1103 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 GFOD1Q9NXC2 390 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 PRR13Q9NZ81 148 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 TMEM59LQ9UK28 342 aa10.31□□□□□ -0.76
SMC5-203ENST00000475540 DNAJA1P31689 397 aaKnown RBP10.3□□□□□ -0.76
SMC5-203ENST00000475540 PCBP3P57721 371 aaKnown RBP10.3□□□□□ -0.76
SMC5-203ENST00000475540 RALGPS1Q5JS13 557 aa10.3□□□□□ -0.76
SMC5-203ENST00000475540 NOL9Q5SY16 702 aaKnown RBP10.3□□□□□ -0.76
SMC5-203ENST00000475540 AXDND1Q5T1B0 1012 aaPredicted RBP10.3□□□□□ -0.76
SMC5-203ENST00000475540 DCAF15Q66K64 600 aa10.3□□□□□ -0.76
SMC5-203ENST00000475540 RNF111Q6ZNA4 994 aa10.3□□□□□ -0.76
SMC5-203ENST00000475540 PPFIBP1Q86W92 1011 aa10.3□□□□□ -0.76
SMC5-203ENST00000475540 FLAD1Q8NFF5 587 aa10.3□□□□□ -0.76
SMC5-203ENST00000475540 DHX38Q92620 1227 aaKnown RBP10.3□□□□□ -0.76
SMC5-203ENST00000475540 FAM86C1Q9NVL1 165 aa10.3□□□□□ -0.76
SMC5-203ENST00000475540 MRVI1Q9Y6F6 885 aa10.3□□□□□ -0.76
SMC5-203ENST00000475540 SLC7A5Q01650 507 aa10.29□□□□□ -0.76
SMC5-203ENST00000475540 TCEAL1Q15170 157 aa10.29□□□□□ -0.76
SMC5-203ENST00000475540 FAM169BQ8N8A8 192 aa10.29□□□□□ -0.76
SMC5-203ENST00000475540 DSCC1Q9BVC3 393 aa10.29□□□□□ -0.76
SMC5-203ENST00000475540 MEIS1O00470 390 aa10.28□□□□□ -0.76
SMC5-203ENST00000475540 PAX4O43316 350 aa10.28□□□□□ -0.76
SMC5-203ENST00000475540 HK2P52789 917 aa10.28□□□□□ -0.76
SMC5-203ENST00000475540 TEKQ02763 1124 aa10.28□□□□□ -0.76
SMC5-203ENST00000475540 LINC00116Q8NCU8 138 aa10.28□□□□□ -0.76
SMC5-203ENST00000475540 TCFL5Q9UL49 500 aa10.28□□□□□ -0.76
SMC5-203ENST00000475540 PCDHB10Q9UN67 800 aa10.28□□□□□ -0.76
SMC5-203ENST00000475540 PAPLNO95428 1278 aa10.27□□□□□ -0.77
SMC5-203ENST00000475540 RAC2P15153 192 aa10.27□□□□□ -0.77
SMC5-203ENST00000475540 CD247P20963 164 aa10.27□□□□□ -0.77
SMC5-203ENST00000475540 RPL10P27635 214 aaKnown RBP10.27□□□□□ -0.77
SMC5-203ENST00000475540 ZC3H6P61129 1189 aaKnown RBP10.27□□□□□ -0.77
SMC5-203ENST00000475540 FOXP3Q9BZS1 431 aa10.27□□□□□ -0.77
SMC5-203ENST00000475540 C19orf73Q9NVV2 129 aa10.27□□□□□ -0.77
SMC5-203ENST00000475540 MINPP1Q9UNW1 487 aa10.27□□□□□ -0.77
SMC5-203ENST00000475540 SHOXO15266 292 aa10.26□□□□□ -0.77
SMC5-203ENST00000475540 SYPP08247 313 aa10.26□□□□□ -0.77
SMC5-203ENST00000475540 GP6Q9HCN6 339 aa10.26□□□□□ -0.77
SMC5-203ENST00000475540 SMAD7O15105 426 aaKnown RBP10.25□□□□□ -0.77
SMC5-203ENST00000475540 ZGLP1P0C6A0 271 aa10.25□□□□□ -0.77
SMC5-203ENST00000475540 ITGA4P13612 1032 aa10.25□□□□□ -0.77
SMC5-203ENST00000475540 DUSP4Q13115 394 aa10.25□□□□□ -0.77
SMC5-203ENST00000475540 TNNI3KQ59H18 835 aa10.25□□□□□ -0.77
SMC5-203ENST00000475540 HEATR6Q6AI08 1181 aaKnown RBP10.25□□□□□ -0.77
SMC5-203ENST00000475540 OXR1Q8N573 874 aa10.25□□□□□ -0.77
SMC5-203ENST00000475540 GMLQ99445 158 aa10.25□□□□□ -0.77
SMC5-203ENST00000475540 ZNF451Q9Y4E5 1061 aa10.25□□□□□ -0.77
SMC5-203ENST00000475540 GSNP06396 782 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 FGRP09769 529 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 ETFBP38117 255 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 ZNF445P59923 1031 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 CWF19L1Q69YN2 538 aaKnown RBP10.24□□□□□ -0.77
SMC5-203ENST00000475540 VHLLQ6RSH7 139 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 WAPLQ7Z5K2 1190 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 MCF2L2Q86YR7 1114 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 SPPL2CQ8IUH8 684 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 PDZD8Q8NEN9 1154 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 FAM168AQ92567 244 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 BRF1Q92994 677 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 KIRREL1Q96J84 757 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms