RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 ZNF445P59923 1031 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 SUMO1P63165 101 aaKnown RBP7.61□□□□□ -1.19
SDHB-205ENST00000475506 TRIM61Q5EBN2 209 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 CNNM4Q6P4Q7 775 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 STRA8Q7Z7C7 330 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 CDH24Q86UP0 819 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 TRIM59Q8IWR1 403 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 RAVER1Q8IY67 606 aaKnown RBP7.61□□□□□ -1.19
SDHB-205ENST00000475506 ARHGEF39Q8N4T4 335 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 AFAP1L2Q8N4X5 818 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 MFSD2AQ8NA29 543 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 BTN2A2Q8WVV5 523 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 BRF1Q92994 677 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 RCC1LQ96I51 464 aaKnown RBP7.61□□□□□ -1.19
SDHB-205ENST00000475506 PSMG3-AS1Q96PY0 264 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 MRPL18Q9H0U6 180 aaKnown RBP7.61□□□□□ -1.19
SDHB-205ENST00000475506 ACSS3Q9H6R3 686 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 PCOLCE2Q9UKZ9 415 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 MAPRE3Q9UPY8 281 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 SUGT1Q9Y2Z0 365 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 DNAJC25-GNG10A0A024R161 153 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 BLACEA4D250 179 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 F8W735 103 aaPredicted RBP7.6□□□□□ -1.19
SDHB-205ENST00000475506 DYNC1LI2O43237 492 aaPredicted RBP7.6□□□□□ -1.19
SDHB-205ENST00000475506 PPM1BO75688 479 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 ALX3O95076 343 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 SOX5P35711 763 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 GMPRP36959 345 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 PREPP48147 710 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 LETMD1Q6P1Q0 360 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 FDX2Q6P4F2 183 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 SHISA2Q6UWI4 295 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 FGD2Q7Z6J4 655 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 JDP2Q8WYK2 163 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 IPO9Q96P70 1041 aaKnown RBP7.6□□□□□ -1.19
SDHB-205ENST00000475506 MIPEPQ99797 713 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 GBP3Q9H0R5 595 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 SLC52A2Q9HAB3 445 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 CGGBP1Q9UFW8 167 aaPredicted RBP7.6□□□□□ -1.19
SDHB-205ENST00000475506 AKT3Q9Y243 479 aa7.6□□□□□ -1.19
SDHB-205ENST00000475506 CYP4F3Q08477 520 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 SNW1Q13573 536 aaKnown RBP7.59□□□□□ -1.19
SDHB-205ENST00000475506 FAM50AQ14320 339 aaKnown RBP7.59□□□□□ -1.19
SDHB-205ENST00000475506 NTRK3Q16288 839 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 NBPF9Q3BBW0 867 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 CT47A1Q5JQC4 288 aaPredicted RBP7.59□□□□□ -1.19
SDHB-205ENST00000475506 ODR4Q5SWX8 454 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 ZNF385CQ66K41 422 aaPredicted RBP7.59□□□□□ -1.19
SDHB-205ENST00000475506 ZNF787Q6DD87 383 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 CDPF1Q6NVV7 123 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 TMEM130Q8N3G9 435 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 GSTCDQ8NEC7 633 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 DDX1Q92499 740 aaKnown RBP7.59□□□□□ -1.19
SDHB-205ENST00000475506 SCLYQ96I15 445 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 LGR6Q9HBX8 967 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 INTS7Q9NVH2 962 aaKnown RBP7.59□□□□□ -1.19
SDHB-205ENST00000475506 MAGEC2Q9UBF1 373 aaPredicted RBP7.59□□□□□ -1.19
SDHB-205ENST00000475506 SFMBT1Q9UHJ3 866 aa7.59□□□□□ -1.19
SDHB-205ENST00000475506 CNTNAP4Q9C0A0 1308 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.58□□□□□ -1.2
SDHB-205ENST00000475506 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.58□□□□□ -1.2
SDHB-205ENST00000475506 NOP56O00567 594 aaKnown RBP7.58□□□□□ -1.2
SDHB-205ENST00000475506 LRRN2O75325 713 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 KCNH1O95259 989 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 EYA4O95677 639 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 ITGA4P13612 1032 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 ELNP15502 786 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 RAB6AP20340 208 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 EXOSC10Q01780 885 aaKnown RBP7.58□□□□□ -1.2
SDHB-205ENST00000475506 ZNF460Q14592 562 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 ANKRD34AQ69YU3 496 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 GTF2IRD2BQ6EKJ0 949 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 BRAPQ7Z569 592 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 GTF2IRD2Q86UP8 949 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 SEMA6CQ9H3T2 930 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 NDOR1Q9UHB4 597 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 FAN1Q9Y2M0 1017 aa7.58□□□□□ -1.2
SDHB-205ENST00000475506 GFRA1P56159 465 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 RNF4P78317 190 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 TRIM28Q13263 835 aaKnown RBP7.57□□□□□ -1.2
SDHB-205ENST00000475506 PPP2R5DQ14738 602 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 PCBP1Q15365 356 aaKnown RBP eCLIP7.57□□□□□ -1.2
SDHB-205ENST00000475506 LCE2AQ5TA79 106 aaPredicted RBP7.57□□□□□ -1.2
SDHB-205ENST00000475506 LHFPL2Q6ZUX7 228 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 FMNL3Q8IVF7 1028 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 FBXL18Q96ME1 805 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 PRDM14Q9GZV8 571 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 MTFR1LQ9H019 292 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 DAGLAQ9Y4D2 1042 aa7.57□□□□□ -1.2
SDHB-205ENST00000475506 TNPO3Q9Y5L0 923 aaKnown RBP7.57□□□□□ -1.2
SDHB-205ENST00000475506 WASHC2CQ9Y4E1 1318 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 A0A087WZG4 1122 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 NFICP08651 508 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 MAP7Q14244 749 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 GRIK4Q16099 956 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 PRSS53Q2L4Q9 553 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 CCDC181Q5TID7 509 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 DENND5AQ6IQ26 1287 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms