RNA–Protein interactions for RNA: ENST00000474952.5

TFAP2A-210, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-210ENST00000474952 SCAF8Q9UPN6 1271 aaKnown RBP28.48■■■□□ 2.15
TFAP2A-210ENST00000474952 CLIC4Q9Y696 253 aa28.48■■■□□ 2.15
TFAP2A-210ENST00000474952 ZNF543Q08ER8 600 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 OXER1Q8TDS5 423 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 RNF181Q9P0P0 153 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 KRT2P35908 639 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 NR5A1Q13285 461 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 MIGA2Q7L4E1 593 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 PGBD1Q96JS3 809 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 TEPSINQ96N21 525 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 SH3GLB2Q9NR46 395 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 TMEM63CQ9P1W3 806 aa28.47■■■□□ 2.15
TFAP2A-210ENST00000474952 NASPP49321 788 aaPredicted RBP28.46■■■□□ 2.15
TFAP2A-210ENST00000474952 UBA5Q9GZZ9 404 aa28.46■■■□□ 2.15
TFAP2A-210ENST00000474952 RIOX1Q9H6W3 641 aa28.46■■■□□ 2.15
TFAP2A-210ENST00000474952 GPCPD1Q9NPB8 672 aa28.46■■■□□ 2.15
TFAP2A-210ENST00000474952 YEATS4O95619 227 aa28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 NPY5RQ15761 445 aa28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 GPATCH4Q5T3I0 446 aaKnown RBP28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 ANO1Q5XXA6 986 aa28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 LINC00301Q8NCQ3 95 aa28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 TRPM4Q8TD43 1214 aa28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 GPKOWQ92917 476 aaPredicted RBP eCLIP28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 RRP36Q96EU6 259 aaKnown RBP28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 BRMS1Q9HCU9 246 aa28.45■■■□□ 2.14
TFAP2A-210ENST00000474952 GOLGA6L4A6NEF3 574 aa28.44■■■□□ 2.14
TFAP2A-210ENST00000474952 NLRP5P59047 1200 aa28.44■■■□□ 2.14
TFAP2A-210ENST00000474952 DCAF4Q8WV16 495 aa28.44■■■□□ 2.14
TFAP2A-210ENST00000474952 CCDC96Q2M329 555 aa28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 WWC2Q6AWC2 1192 aa28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 ZBTB21Q9ULJ3 1066 aa28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 STK38Q15208 465 aa28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 SLFN13Q68D06 897 aa28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 GMCL1P1Q8NEA9 526 aa28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 SYAP1Q96A49 352 aaPredicted RBP28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 VAT1LQ9HCJ6 419 aa28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 BARHL2Q9NY43 387 aa28.43■■■□□ 2.14
TFAP2A-210ENST00000474952 CAP2P40123 477 aa28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 EPS15P42566 896 aa28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 ZSCAN23Q3MJ62 389 aa28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 HEATR3Q7Z4Q2 680 aa28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 FAM177A1Q8N128 213 aaPredicted RBP28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 PIGSQ96S52 555 aa28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 DEFB129Q9H1M3 183 aa28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 SEC63Q9UGP8 760 aaKnown RBP28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 SYNPO2Q9UMS6 1093 aa28.42■■■□□ 2.14
TFAP2A-210ENST00000474952 STXBP3O00186 592 aa28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 DDNO94850 711 aaPredicted RBP28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 CALML3P27482 149 aa28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 C9orf131Q5VYM1 1079 aa28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 TTBK2Q6IQ55 1244 aa28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 KCTD1Q719H9 257 aa28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 HOMER1Q86YM7 354 aa28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 KCNG4Q8TDN1 519 aa28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 TNFRSF25Q93038 417 aa28.41■■■□□ 2.14
TFAP2A-210ENST00000474952 SF3A1Q15459 793 aaKnown RBP28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 RILPL1Q5EBL4 403 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 ANGEL2Q5VTE6 544 aaKnown RBP28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 TYW1BQ6NUM6 668 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 APOBEC3FQ8IUX4 373 aaKnown RBP28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 CCDC148Q8NFR7 591 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 A0A1W2PRG0 241 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 F5H6K3 240 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 SPTLC2O15270 562 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 RAD21O60216 631 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 SLC1A4P43007 532 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 ME1P48163 572 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 TOB1P50616 345 aaPredicted RBP28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 KLRC3Q07444 240 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 ARHGEF10LQ9HCE6 1279 aa28.4■■■□□ 2.14
TFAP2A-210ENST00000474952 PHF20L1A8MW92 1017 aa28.39■■■□□ 2.13
TFAP2A-210ENST00000474952 SLC39A14Q15043 492 aa28.39■■■□□ 2.13
TFAP2A-210ENST00000474952 GMCL1Q96IK5 515 aa28.39■■■□□ 2.13
TFAP2A-210ENST00000474952 ATAD5Q96QE3 1844 aa28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 HIRAP54198 1017 aaPredicted RBP28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 PTPAQ15257 358 aa28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 ADGRF4Q8IZF3 695 aa28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 BLIDQ8IZY5 108 aa28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 BICD2Q8TD16 824 aa28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 JMJD4Q9H9V9 463 aa28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 PCDHA7Q9UN72 937 aa28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 PCDHA4Q9UN74 947 aa28.38■■■□□ 2.13
TFAP2A-210ENST00000474952 NDUFB10O96000 172 aa28.37■■■□□ 2.13
TFAP2A-210ENST00000474952 LIG1P18858 919 aa28.37■■■□□ 2.13
TFAP2A-210ENST00000474952 EARS2Q5JPH6 523 aaKnown RBP28.37■■■□□ 2.13
TFAP2A-210ENST00000474952 GALNT17Q6IS24 598 aa28.37■■■□□ 2.13
TFAP2A-210ENST00000474952 DAGLBQ8NCG7 672 aa28.37■■■□□ 2.13
TFAP2A-210ENST00000474952 ISY1Q9ULR0 285 aaKnown RBP28.37■■■□□ 2.13
TFAP2A-210ENST00000474952 FAM205CA6NFA0 338 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 ADAMTS3O15072 1205 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 SLC16A2P36021 539 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 ZNF445P59923 1031 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 CCDC183Q5T5S1 534 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 CCDC12Q8WUD4 166 aaPredicted RBP28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 TMX2Q9Y320 296 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 hCG_1984214I3L0E3 225 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 ASNSP08243 561 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 LMOD1P29536 600 aaPredicted RBP28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 ECE1P42892 770 aa28.36■■■□□ 2.13
TFAP2A-210ENST00000474952 NAPAP54920 295 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms