RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 CD99L2Q8TCZ2 262 aa9.44□□□□□ -0.9
HPS1-210ENST00000474873 TMEM47Q9BQJ4 181 aa9.44□□□□□ -0.9
HPS1-210ENST00000474873 ZKSCAN3Q9BRR0 538 aa9.44□□□□□ -0.9
HPS1-210ENST00000474873 UBAC1Q9BSL1 405 aa9.44□□□□□ -0.9
HPS1-210ENST00000474873 EFCC1Q9HA90 598 aa9.44□□□□□ -0.9
HPS1-210ENST00000474873 ADAMTS5Q9UNA0 930 aa9.44□□□□□ -0.9
HPS1-210ENST00000474873 TAF6LQ9Y6J9 622 aa9.44□□□□□ -0.9
HPS1-210ENST00000474873 HTTP42858 3142 aa9.44□□□□□ -0.9
HPS1-210ENST00000474873 PLA2G6O60733 806 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 EIF5BO60841 1220 aaKnown RBP9.43□□□□□ -0.9
HPS1-210ENST00000474873 BMP3P12645 472 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 ZKSCAN1P17029 563 aaPredicted RBP9.43□□□□□ -0.9
HPS1-210ENST00000474873 MCCP23508 829 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 SLC1A4P43007 532 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 PSMC4P43686 418 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 FCGRTP55899 365 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 CCNA1P78396 465 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 STOX1Q6ZVD7 989 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 CYB5R4Q7L1T6 521 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 OTOP1Q7RTM1 612 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 ENAHQ8N8S7 591 aaPredicted RBP9.43□□□□□ -0.9
HPS1-210ENST00000474873 PRPF38AQ8NAV1 312 aaKnown RBP9.43□□□□□ -0.9
HPS1-210ENST00000474873 DCAF4Q8WV16 495 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 NUP88Q99567 741 aaPredicted RBP9.43□□□□□ -0.9
HPS1-210ENST00000474873 SLF1Q9BQI6 1058 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 TXNRD2Q9NNW7 524 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 FEM1BQ9UK73 627 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 PPP1R9AQ9ULJ8 1098 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 MYH4Q9Y623 1939 aa9.43□□□□□ -0.9
HPS1-210ENST00000474873 TNKSO95271 1327 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 VWA5AO00534 786 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 CNMDO75829 334 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 FMNL1O95466 1100 aaPredicted RBP9.42□□□□□ -0.9
HPS1-210ENST00000474873 HOXD10P28358 340 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 MCM5P33992 734 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 HSPA4P34932 840 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 PRMT2P55345 433 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 ERVK-9P63128 1117 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 ERVK-24P63145 666 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 CAP1Q01518 475 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 KRT32Q14532 448 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 SART3Q15020 963 aaKnown RBP9.42□□□□□ -0.9
HPS1-210ENST00000474873 SEC23AQ15436 765 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 Q3C1V9 767 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 MB21D2Q8IYB1 491 aaPredicted RBP9.42□□□□□ -0.9
HPS1-210ENST00000474873 CHURC1Q8WUH1 139 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 KCNB2Q92953 911 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 ATG4CQ96DT6 458 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 TRIM47Q96LD4 638 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 MTA3Q9BTC8 594 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 PAGR1Q9BTK6 254 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 ARHGAP39Q9C0H5 1083 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 KAT14Q9H8E8 782 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 FBXO28Q9NVF7 368 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 BTBD7Q9P203 1132 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 TRIM17Q9Y577 477 aa9.42□□□□□ -0.9
HPS1-210ENST00000474873 ERICH2A1L162 156 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 TMEM232C9JQI7 657 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 IFIT3O14879 490 aaKnown RBP9.41□□□□□ -0.9
HPS1-210ENST00000474873 SNHG28P0DPA3 235 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 FDX1P10109 184 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 PDHBP11177 359 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 CTGFP29279 349 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 MAPK4P31152 587 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 STAT2P52630 851 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 IFIT1BQ5T764 474 aaKnown RBP9.41□□□□□ -0.9
HPS1-210ENST00000474873 FBXO46Q6PJ61 603 aaPredicted RBP9.41□□□□□ -0.9
HPS1-210ENST00000474873 FAM160B2Q86V87 743 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 CCAR1Q8IX12 1150 aaKnown RBP9.41□□□□□ -0.9
HPS1-210ENST00000474873 RASEFQ8IZ41 740 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 PNMA1Q8ND90 353 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 IGDCC4Q8TDY8 1250 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 COA7Q96BR5 231 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 NEK1Q96PY6 1258 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 USP26Q9BXU7 913 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 MCOLN1Q9GZU1 580 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 SPATC1LQ9H0A9 340 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 SRRDQ9UH36 339 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 PTPN22Q9Y2R2 807 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 RLFQ13129 1914 aa9.41□□□□□ -0.9
HPS1-210ENST00000474873 WDR19Q8NEZ3 1342 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 TNPO2O14787 897 aaKnown RBP9.4□□□□□ -0.9
HPS1-210ENST00000474873 ATP2A1O14983 1001 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 PRC1O43663 620 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 PEX10O60683 326 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 ZBED4O75132 1171 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 HMGB1P09429 215 aaKnown RBP9.4□□□□□ -0.9
HPS1-210ENST00000474873 ANTXR2P58335 489 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 ZNF543Q08ER8 600 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 TMEM132BQ14DG7 1078 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 WTAPQ15007 396 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 CCDC96Q2M329 555 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 TMEM67Q5HYA8 995 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 GPATCH4Q5T3I0 446 aaKnown RBP9.4□□□□□ -0.9
HPS1-210ENST00000474873 SAMD1Q6SPF0 538 aaPredicted RBP9.4□□□□□ -0.9
HPS1-210ENST00000474873 BTNL9Q6UXG8 535 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 KCTD1Q719H9 257 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 CHST3Q7LGC8 479 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 TMTC2Q8N394 836 aa9.4□□□□□ -0.9
HPS1-210ENST00000474873 SHCBP1Q8NEM2 672 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms