RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SMIM22K7EJ46 135 aa18.01■□□□□ 0.47
VARS-223ENST00000474643 MSCO60682 206 aa18.01■□□□□ 0.47
VARS-223ENST00000474643 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
VARS-223ENST00000474643 FCER1AP12319 257 aa18.01■□□□□ 0.47
VARS-223ENST00000474643 SBK1Q52WX2 424 aa18.01■□□□□ 0.47
VARS-223ENST00000474643 POTEEQ6S8J3 1075 aa18.01■□□□□ 0.47
VARS-223ENST00000474643 SHCBP1Q8NEM2 672 aa18.01■□□□□ 0.47
VARS-223ENST00000474643 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
VARS-223ENST00000474643 M0R2C6 588 aa18■□□□□ 0.47
VARS-223ENST00000474643 SLC25A27O95847 323 aa18■□□□□ 0.47
VARS-223ENST00000474643 CYP2C19P33261 490 aa18■□□□□ 0.47
VARS-223ENST00000474643 FXR1P51114 621 aaKnown RBP eCLIP18■□□□□ 0.472e-6■■■□□ 17.9
VARS-223ENST00000474643 KIAA1755Q5JYT7 1200 aa18■□□□□ 0.47
VARS-223ENST00000474643 FAM83BQ5T0W9 1011 aa18■□□□□ 0.47
VARS-223ENST00000474643 RILPL2Q969X0 211 aa18■□□□□ 0.47
VARS-223ENST00000474643 EVI5LQ96CN4 794 aa18■□□□□ 0.47
VARS-223ENST00000474643 NAPBQ9H115 298 aa18■□□□□ 0.47
VARS-223ENST00000474643 HOXC6P09630 235 aa17.99■□□□□ 0.47
VARS-223ENST00000474643 PDE4BQ07343 736 aa17.99■□□□□ 0.47
VARS-223ENST00000474643 MMP19Q99542 508 aa17.99■□□□□ 0.47
VARS-223ENST00000474643 FLRT1Q9NZU1 646 aa17.99■□□□□ 0.47
VARS-223ENST00000474643 DDX20Q9UHI6 824 aaKnown RBP17.99■□□□□ 0.47
VARS-223ENST00000474643 PATL2C9JE40 543 aaKnown RBP17.98■□□□□ 0.47
VARS-223ENST00000474643 PRDM1O75626 825 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 TSPY3P0CV98 308 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 TSPY8P0CW00 308 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 RASA1P20936 1047 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 COPB2P35606 906 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 SLC4A3P48751 1232 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 KCTD2Q14681 263 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 PLEKHM2Q8IWE5 1019 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 NPLOC4Q8TAT6 608 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 FBXO28Q9NVF7 368 aa17.98■□□□□ 0.47
VARS-223ENST00000474643 ZMYND8Q9ULU4 1186 aaPredicted RBP17.98■□□□□ 0.47
VARS-223ENST00000474643 ROBO3Q96MS0 1386 aa17.97■□□□□ 0.47
VARS-223ENST00000474643 IKQ13123 557 aaPredicted RBP17.97■□□□□ 0.47
VARS-223ENST00000474643 SIAH1Q8IUQ4 282 aa17.97■□□□□ 0.47
VARS-223ENST00000474643 IFNL3Q8IZI9 196 aa17.97■□□□□ 0.47
VARS-223ENST00000474643 ABRAQ8N0Z2 381 aa17.97■□□□□ 0.47
VARS-223ENST00000474643 SLF1Q9BQI6 1058 aa17.97■□□□□ 0.47
VARS-223ENST00000474643 EPB41L4AQ9HCS5 686 aaPredicted RBP17.97■□□□□ 0.47
VARS-223ENST00000474643 CLIP2Q9UDT6 1046 aa17.97■□□□□ 0.47
VARS-223ENST00000474643 PPP1R9AQ9ULJ8 1098 aa17.97■□□□□ 0.47
VARS-223ENST00000474643 KBTBD13C9JR72 458 aa17.96■□□□□ 0.47
VARS-223ENST00000474643 SYN1P17600 705 aa17.96■□□□□ 0.47
VARS-223ENST00000474643 TMEM132BQ14DG7 1078 aa17.96■□□□□ 0.47
VARS-223ENST00000474643 OLFML2BQ68BL8 750 aa17.96■□□□□ 0.47
VARS-223ENST00000474643 NUP88Q99567 741 aaPredicted RBP17.96■□□□□ 0.47
VARS-223ENST00000474643 A0A0G2JMZ2 1700 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 TRIOBPQ9H2D6 2365 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 F5H6K3 240 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 VWA5AO00534 786 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 ZBED4O75132 1171 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 TTLL1O95922 423 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 STAT3P40763 770 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 KLRC3Q07444 240 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 LHX8Q68G74 356 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 ARRDC4Q8NCT1 418 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 SEC62Q99442 399 aaKnown RBP17.95■□□□□ 0.46
VARS-223ENST00000474643 SENP6Q9GZR1 1112 aaPredicted RBP17.95■□□□□ 0.46
VARS-223ENST00000474643 OSBPL3Q9H4L5 887 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 NYAP2Q9P242 653 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 PRKAG2Q9UGJ0 569 aa17.95■□□□□ 0.46
VARS-223ENST00000474643 ZNF236Q9UL36 1845 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 A0A1W2PPC1 479 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 NDUFB10O96000 172 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 ZMYM1Q5SVZ6 1142 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 ANO1Q5XXA6 986 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 RIOX2Q8IUF8 465 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 KIFC2Q96AC6 838 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 CCDC136Q96JN2 1154 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 TEX13BQ9BXU2 312 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 PFASO15067 1338 aa17.94■□□□□ 0.46
VARS-223ENST00000474643 DNM1LO00429 736 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 PGK2P07205 417 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 CYBAP13498 195 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 PPARAQ07869 468 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 SNRNP48Q6IEG0 339 aaKnown RBP17.93■□□□□ 0.46
VARS-223ENST00000474643 CENPQQ7L2Z9 268 aaPredicted RBP17.93■□□□□ 0.46
VARS-223ENST00000474643 CPXCR1Q8N123 301 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 LRRC47Q8N1G4 583 aaKnown RBP17.93■□□□□ 0.46
VARS-223ENST00000474643 PRPF38AQ8NAV1 312 aaKnown RBP17.93■□□□□ 0.46
VARS-223ENST00000474643 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 CEP95Q96GE4 821 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 MAML3Q96JK9 1138 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.46
VARS-223ENST00000474643 TOMM22Q9NS69 142 aa17.93■□□□□ 0.46
VARS-223ENST00000474643 TSPY2A6NKD2 308 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 SEPT4O43236 478 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 COBLO75128 1261 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 PDE4AP27815 886 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 ATN1P54259 1190 aaPredicted RBP17.92■□□□□ 0.46
VARS-223ENST00000474643 TFAP4Q01664 338 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 FAM47AQ5JRC9 791 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 LBHD1Q9BQE6 289 aaPredicted RBP17.92■□□□□ 0.46
VARS-223ENST00000474643 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 FEM1BQ9UK73 627 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 CNPY2Q9Y2B0 182 aa17.92■□□□□ 0.46
VARS-223ENST00000474643 RANBP2P49792 3224 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms