RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 PSMD1Q99460 953 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 DBNDD1Q9H9R9 158 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 SNHG28P0DPA3 235 aa24.85■■□□□ 1.57
CCM2-206ENST00000474617 C11orf57Q6ZUT1 292 aaPredicted RBP24.85■■□□□ 1.57
CCM2-206ENST00000474617 TRIM5Q9C035 493 aa24.85■■□□□ 1.57
CCM2-206ENST00000474617 DACH1Q9UI36 760 aa24.85■■□□□ 1.57
CCM2-206ENST00000474617 hCG_1642624A0A1W2PR95 340 aa24.84■■□□□ 1.57
CCM2-206ENST00000474617 ZNF75DP51815 510 aa24.84■■□□□ 1.57
CCM2-206ENST00000474617 CCDC93Q567U6 631 aa24.84■■□□□ 1.57
CCM2-206ENST00000474617 NT5DC1Q5TFE4 455 aa24.84■■□□□ 1.57
CCM2-206ENST00000474617 ZMYND12Q9H0C1 365 aa24.84■■□□□ 1.57
CCM2-206ENST00000474617 DDX4Q9NQI0 724 aaKnown RBP24.84■■□□□ 1.57
CCM2-206ENST00000474617 PI4KBQ9UBF8 816 aa24.84■■□□□ 1.57
CCM2-206ENST00000474617 ZNF646O15015 1829 aaPredicted RBP24.84■■□□□ 1.57
CCM2-206ENST00000474617 CCDC194A0A1B0GVG4 234 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 M0R2N6 131 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 STXBP3O00186 592 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 SCNN1DP51172 638 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 GPATCH4Q5T3I0 446 aaKnown RBP24.83■■□□□ 1.57
CCM2-206ENST00000474617 PPP1R18Q6NYC8 613 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 KRT25Q7Z3Z0 450 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 FOXP4Q8IVH2 680 aaPredicted RBP24.83■■□□□ 1.57
CCM2-206ENST00000474617 TTLL6Q8N841 843 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 RIOX1Q9H6W3 641 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 C6orf50Q9HD87 102 aa24.83■■□□□ 1.57
CCM2-206ENST00000474617 ENTPD3O75355 529 aa24.82■■□□□ 1.56
CCM2-206ENST00000474617 DHX40Q8IX18 779 aaKnown RBP24.82■■□□□ 1.56
CCM2-206ENST00000474617 RTN4Q9NQC3 1192 aaKnown RBP24.82■■□□□ 1.56
CCM2-206ENST00000474617 GREB1LQ9C091 1923 aaPredicted RBP24.82■■□□□ 1.56
CCM2-206ENST00000474617 PSME4Q14997 1843 aa24.82■■□□□ 1.56
CCM2-206ENST00000474617 CYTH3O43739 400 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 SMC2O95347 1197 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 CHRNA5P30532 468 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 LONRF3Q496Y0 759 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 WWC2Q6AWC2 1192 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 PIK3AP1Q6ZUJ8 805 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 CSRNP2Q9H175 543 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 SYNPO2Q9UMS6 1093 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 PDHBP11177 359 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 SHMT1P34896 483 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 LONP1P36776 959 aaKnown RBP24.81■■□□□ 1.56
CCM2-206ENST00000474617 POSTNQ15063 836 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 HEATR3Q7Z4Q2 680 aa24.81■■□□□ 1.56
CCM2-206ENST00000474617 ATRNL1Q5VV63 1379 aa24.8■■□□□ 1.56
CCM2-206ENST00000474617 AP5Z1O43299 807 aa24.8■■□□□ 1.56
CCM2-206ENST00000474617 TXLNAP40222 546 aa24.8■■□□□ 1.56
CCM2-206ENST00000474617 MMP14P50281 582 aa24.8■■□□□ 1.56
CCM2-206ENST00000474617 MDM2Q00987 491 aaPredicted RBP24.8■■□□□ 1.56
CCM2-206ENST00000474617 PTGDRQ13258 359 aa24.8■■□□□ 1.56
CCM2-206ENST00000474617 METTL16Q86W50 562 aaKnown RBP24.8■■□□□ 1.56
CCM2-206ENST00000474617 TRIM34Q9BYJ4 488 aa24.8■■□□□ 1.56
CCM2-206ENST00000474617 POLR2DO15514 142 aaKnown RBP24.79■■□□□ 1.56
CCM2-206ENST00000474617 PPIP5K2O43314 1243 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 SLFN14P0C7P3 912 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 AKR1B1P15121 316 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 ATP2B1P20020 1258 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 PRPHP41219 470 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 SEMA3FQ13275 785 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 DPCR1Q3MIW9 517 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 EARS2Q5JPH6 523 aaKnown RBP24.79■■□□□ 1.56
CCM2-206ENST00000474617 KIAA0825Q8IV33 1275 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 MLKLQ8NB16 471 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 GLT8D2Q9H1C3 349 aa24.79■■□□□ 1.56
CCM2-206ENST00000474617 NEMFO60524 1076 aa24.78■■□□□ 1.56
CCM2-206ENST00000474617 NAPAP54920 295 aa24.78■■□□□ 1.56
CCM2-206ENST00000474617 AOC3Q16853 763 aa24.78■■□□□ 1.56
CCM2-206ENST00000474617 MKL1Q969V6 931 aa24.78■■□□□ 1.56
CCM2-206ENST00000474617 MXD3Q9BW11 206 aa24.78■■□□□ 1.56
CCM2-206ENST00000474617 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.78■■□□□ 1.56
CCM2-206ENST00000474617 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.78■■□□□ 1.56
CCM2-206ENST00000474617 SCN9AQ15858 1988 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 ZNF174Q15697 407 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.77■■□□□ 1.56
CCM2-206ENST00000474617 AOPEPQ8N6M6 819 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 SPATA20Q8TB22 786 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 GPKOWQ92917 476 aaPredicted RBP eCLIP24.77■■□□□ 1.56
CCM2-206ENST00000474617 SMARCE1Q969G3 411 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 KANSL2Q9H9L4 492 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 NYAP2Q9P242 653 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 PCDHA6Q9UN73 950 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 PCDHA8Q9Y5H6 950 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 KIF13BQ9NQT8 1826 aa24.77■■□□□ 1.56
CCM2-206ENST00000474617 FAM205CA6NFA0 338 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 ACTN4O43707 911 aaKnown RBP24.76■■□□□ 1.55
CCM2-206ENST00000474617 SARSP49591 514 aaKnown RBP24.76■■□□□ 1.55
CCM2-206ENST00000474617 RBM5P52756 815 aaKnown RBP eCLIP24.76■■□□□ 1.55
CCM2-206ENST00000474617 USP17L2Q6R6M4 530 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 CCDC125Q86Z20 511 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 IQUBQ8NA54 791 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 HDAC9Q9UKV0 1011 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 MYL5Q02045 173 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 ZNF543Q08ER8 600 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 SLC35G1Q2M3R5 365 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 TATDN1Q6P1N9 297 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 TEX2Q8IWB9 1127 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 DRC7Q8IY82 874 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 DCAF4Q8WV16 495 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 TMOD2Q9NZR1 351 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 PCDHA5Q9Y5H7 936 aa24.76■■□□□ 1.55
CCM2-206ENST00000474617 USP17L5A8MUK1 530 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms