RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 SEC31AO94979 1220 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 MMP1P03956 469 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 CALM1P0DP23 149 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 CALM2P0DP24 149 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 CALM3P0DP25 149 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 PRLRP16471 622 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 ATP2B1P20020 1258 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 EEF1GP26641 437 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 ST5P78524 1137 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 AKAP17AQ02040 695 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 PLCB4Q15147 1175 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 GLE1Q53GS7 698 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 ZNF569Q5MCW4 686 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 CDKAL1Q5VV42 579 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 MCTP2Q6DN12 878 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 APOA5Q6Q788 366 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 YTHDF3Q7Z739 585 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 TADA2BQ86TJ2 420 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 FAM114A1Q8IWE2 563 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 COG1Q8WTW3 980 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 P3H4Q92791 437 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 NEUROD6Q96NK8 337 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 RUFY1Q96T51 708 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 EIF3CQ99613 913 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 NACAP1Q9BZK3 213 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 FTOQ9C0B1 505 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 ANKZF1Q9H8Y5 726 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 NCOA5Q9HCD5 579 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 LUC7LQ9NQ29 371 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 ST7Q9NRC1 585 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 LIMA1Q9UHB6 759 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 RWDD2AQ9UIY3 292 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 SLC12A7Q9Y666 1083 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 TAF1LQ8IZX4 1826 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 MROH7-TTC4A0A0A0MT08 1334 aa9.03□□□□□ -0.96
CCDC93-208ENST00000474546 GOLGA8AA7E2F4 631 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 H7C1D1 291 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 EPB41P11171 864 aaKnown RBP9.02□□□□□ -0.97
CCDC93-208ENST00000474546 TNFRSF8P28908 595 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 PBX1P40424 430 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 USP14P54578 494 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 CDK17Q00537 523 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 GUCY1B3Q02153 619 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 AIMP1Q12904 312 aaKnown RBP9.02□□□□□ -0.97
CCDC93-208ENST00000474546 TRIM28Q13263 835 aaKnown RBP9.02□□□□□ -0.97
CCDC93-208ENST00000474546 PNOCQ13519 176 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 CCDC57Q2TAC2 916 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 EMBQ6PCB8 327 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 NFXL1Q6ZNB6 911 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 CCDC129Q6ZRS4 1044 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 TOGARAM2Q6ZUX3 1019 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 ARMC9Q7Z3E5 817 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 EIF1ADQ8N9N8 165 aaKnown RBP9.02□□□□□ -0.97
CCDC93-208ENST00000474546 STAG1Q8WVM7 1258 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 OTUD5Q96G74 571 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 PLA2G12BQ9BX93 195 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 LRRC2Q9BYS8 371 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 CCDC87Q9NVE4 849 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 ADD3Q9UEY8 706 aaKnown RBP9.02□□□□□ -0.97
CCDC93-208ENST00000474546 SAR1BQ9Y6B6 198 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 TAF6LQ9Y6J9 622 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 TJP1Q07157 1748 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 BRCA2P51587 3418 aa9.02□□□□□ -0.97
CCDC93-208ENST00000474546 DICER1Q9UPY3 1922 aaKnown RBP9.01□□□□□ -0.97
CCDC93-208ENST00000474546 TRIM75PA6NK02 468 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 USO1O60763 962 aaKnown RBP9.01□□□□□ -0.97
CCDC93-208ENST00000474546 ERLIN2O94905 339 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 FGAP02671 866 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 MMP10P09238 476 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 CDR1P51861 262 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 CASP7P55210 303 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 LMNB2Q03252 620 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 PROSER3Q2NL68 480 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 LONRF3Q496Y0 759 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 PAPD7Q5XG87 772 aaKnown RBP9.01□□□□□ -0.97
CCDC93-208ENST00000474546 LMBR1LQ6UX01 489 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCDC93-208ENST00000474546 ARFGAP2Q8N6H7 521 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 OR8K1Q8NGG5 319 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 FBXW7Q969H0 707 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 RNF26Q9BY78 433 aaPredicted RBP9.01□□□□□ -0.97
CCDC93-208ENST00000474546 CUEDC2Q9H467 287 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 FAM204AQ9H8W3 233 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 ABCB6Q9NP58 842 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 RBM28Q9NW13 759 aaKnown RBP9.01□□□□□ -0.97
CCDC93-208ENST00000474546 FAM184BQ9ULE4 1060 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 FAN1Q9Y2M0 1017 aa9.01□□□□□ -0.97
CCDC93-208ENST00000474546 CEP290O15078 2479 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 MUC3AQ02505 3323 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 UBR3Q6ZT12 1888 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 GOLGA6CA6NDK9 693 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 GOLGA6BA6NDN3 693 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 H3BQF6 201 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 AOC2O75106 756 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 RNF40O75150 1001 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 GOLGA6DP0CG33 693 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 TCP1P17987 556 aaKnown RBP9□□□□□ -0.97
CCDC93-208ENST00000474546 MARCKSP29966 332 aaPredicted RBP9□□□□□ -0.97
CCDC93-208ENST00000474546 RASSF7Q02833 373 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 HSP90AB3PQ58FF7 597 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms