RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 CAP2P40123 477 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 FMR1Q06787 632 aaKnown RBP eCLIP23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 SYNE3Q6ZMZ3 975 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 NSUN7Q8NE18 718 aaKnown RBP23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 DDX11Q96FC9 970 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 CLEC11AQ9Y240 323 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 EEF2P13639 858 aaKnown RBP23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 INPP5BP32019 993 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 TMEM179Q6ZVK1 233 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 CCDC82Q8N4S0 544 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 FANCBQ8NB91 859 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 ZC3H15Q8WU90 426 aaKnown RBP23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 PPP2R3BQ9Y5P8 575 aa23.96■■□□□ 1.43
SMIM11A-204ENST00000474455 TTLL1O95922 423 aa23.95■■□□□ 1.42
SMIM11A-204ENST00000474455 VEGFAP15692 232 aaPredicted RBP23.95■■□□□ 1.42
SMIM11A-204ENST00000474455 CCDC178Q5BJE1 867 aa23.95■■□□□ 1.42
SMIM11A-204ENST00000474455 MAP1SQ66K74 1059 aaPredicted RBP23.95■■□□□ 1.42
SMIM11A-204ENST00000474455 PNMA8AQ86V59 439 aaPredicted RBP23.95■■□□□ 1.42
SMIM11A-204ENST00000474455 FAM200AQ8TCP9 573 aa23.95■■□□□ 1.42
SMIM11A-204ENST00000474455 ZBTB21Q9ULJ3 1066 aa23.95■■□□□ 1.42
SMIM11A-204ENST00000474455 KIF3AQ9Y496 699 aa23.95■■□□□ 1.42
SMIM11A-204ENST00000474455 VPS37CA5D8V6 355 aaPredicted RBP23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 UBE2Q2LH0YL09 131 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 NTRK3Q16288 839 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 MAP3K11Q16584 847 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 CABP5Q9NP86 173 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 TOP1P11387 765 aaKnown RBP23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 ICA1Q05084 483 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 RTN1Q16799 776 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 LARP1BQ659C4 914 aaKnown RBP23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 STAG2Q8N3U4 1231 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 ZKSCAN4Q969J2 545 aaPredicted RBP23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 SCAND2PQ9GZW5 306 aaPredicted RBP23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 KANSL2Q9H9L4 492 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 TAOK2Q9UL54 1235 aa23.94■■□□□ 1.42
SMIM11A-204ENST00000474455 DOCK1Q14185 1865 aa23.93■■□□□ 1.42
SMIM11A-204ENST00000474455 A0A1W2PRG0 241 aa23.93■■□□□ 1.42
SMIM11A-204ENST00000474455 PLEKHA8P1O95397 391 aa23.93■■□□□ 1.42
SMIM11A-204ENST00000474455 ECE1P42892 770 aa23.93■■□□□ 1.42
SMIM11A-204ENST00000474455 PHKBQ93100 1093 aa23.93■■□□□ 1.42
SMIM11A-204ENST00000474455 NUP62CLQ9H1M0 184 aa23.93■■□□□ 1.42
SMIM11A-204ENST00000474455 PTPDC1A2A3K4 754 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 FDPSP14324 419 aaKnown RBP23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 SMARCC2Q8TAQ2 1214 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 ACER1Q8TDN7 264 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 CDCA5Q96FF9 252 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 ZNF341Q9BYN7 854 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 OTOFQ9HC10 1997 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 NID2Q14112 1375 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 USP2O75604 605 aaPredicted RBP23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 DDAH1O94760 285 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 GOLGA8HP0CJ92 632 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 DCAF15Q66K64 600 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 WRNIP1Q96S55 665 aa23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 DDX19AQ9NUU7 478 aaKnown RBP23.92■■□□□ 1.42
SMIM11A-204ENST00000474455 USP17L5A8MUK1 530 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 TRAF5O00463 557 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 CPLX1O14810 134 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 SUPT20HL1Q3ZLR7 823 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 USP17L2Q6R6M4 530 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 MOB2Q70IA6 237 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 NBPF11Q86T75 865 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 KLRG1Q96E93 195 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 CPVLQ9H3G5 476 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 NYAP2Q9P242 653 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 MAD2L2Q9UI95 211 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 ZNF112Q9UJU3 913 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 PHIPQ8WWQ0 1821 aa23.91■■□□□ 1.42
SMIM11A-204ENST00000474455 RAD21O60216 631 aa23.9■■□□□ 1.42
SMIM11A-204ENST00000474455 RBM43Q6ZSC3 357 aaKnown RBP23.9■■□□□ 1.42
SMIM11A-204ENST00000474455 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
SMIM11A-204ENST00000474455 MKL1Q969V6 931 aa23.9■■□□□ 1.42
SMIM11A-204ENST00000474455 AP5Z1O43299 807 aa23.89■■□□□ 1.41
SMIM11A-204ENST00000474455 CTNND1O60716 968 aaKnown RBP23.89■■□□□ 1.41
SMIM11A-204ENST00000474455 CAVIN2O95810 425 aa23.89■■□□□ 1.41
SMIM11A-204ENST00000474455 TYRO3Q06418 890 aa23.89■■□□□ 1.41
SMIM11A-204ENST00000474455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.89■■□□□ 1.41
SMIM11A-204ENST00000474455 SRBD1Q8N5C6 995 aaKnown RBP23.89■■□□□ 1.41
SMIM11A-204ENST00000474455 LLPHQ9BRT6 129 aaKnown RBP23.89■■□□□ 1.41
SMIM11A-204ENST00000474455 KCNF1Q9H3M0 494 aa23.89■■□□□ 1.41
SMIM11A-204ENST00000474455 FRMPD2Q68DX3 1309 aaPredicted RBP23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 hCG_1642624A0A1W2PR95 340 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 CALM1P0DP23 149 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 CALM2P0DP24 149 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 CALM3P0DP25 149 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 PDHBP11177 359 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 FOSBP53539 338 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 RCAN1P53805 252 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 GRM4Q14833 912 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 SLC35G1Q2M3R5 365 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 KIAA1755Q5JYT7 1200 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 CTCFLQ8NI51 663 aaPredicted RBP23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 AIFM3Q96NN9 605 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 PAPPA2Q9BXP8 1791 aa23.88■■□□□ 1.41
SMIM11A-204ENST00000474455 DHX16O60231 1041 aaKnown RBP23.87■■□□□ 1.41
SMIM11A-204ENST00000474455 ASNSP08243 561 aa23.87■■□□□ 1.41
SMIM11A-204ENST00000474455 FUT2Q10981 343 aa23.87■■□□□ 1.41
SMIM11A-204ENST00000474455 ZNF710Q8N1W2 664 aa23.87■■□□□ 1.41
SMIM11A-204ENST00000474455 MRVI1Q9Y6F6 885 aa23.87■■□□□ 1.41
SMIM11A-204ENST00000474455 ZYXQ15942 572 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms