RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
SMPD4-217ENST00000473720 MB21D1Q8N884 522 aa14.29□□□□□ -0.12
SMPD4-217ENST00000473720 CRBNQ96SW2 442 aa14.29□□□□□ -0.12
SMPD4-217ENST00000473720 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-217ENST00000473720 EPB41L4AQ9HCS5 686 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-217ENST00000473720 STRNO43815 780 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 COBLO75128 1261 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 TMEM132BQ14DG7 1078 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 PRAMEF19Q5SWL8 479 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-217ENST00000473720 TRPV1Q8NER1 839 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 SENP6Q9GZR1 1112 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-217ENST00000473720 CLIP2Q9UDT6 1046 aa14.28□□□□□ -0.12
SMPD4-217ENST00000473720 DDX20Q9UHI6 824 aaKnown RBP14.28□□□□□ -0.12
SMPD4-217ENST00000473720 ISY1Q9ULR0 285 aaKnown RBP14.28□□□□□ -0.12
SMPD4-217ENST00000473720 HOXC6P09630 235 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 FCER1AP12319 257 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 GNAT2P19087 354 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 ATN1P54259 1190 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-217ENST00000473720 LRRC26Q2I0M4 334 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 LRRFIP1Q32MZ4 808 aaKnown RBP14.27□□□□□ -0.13
SMPD4-217ENST00000473720 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 SHCBP1Q8NEM2 672 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 PI4K2BQ8TCG2 481 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 MMP19Q99542 508 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMPD4-217ENST00000473720 MROH8Q9H579 483 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 SLC5A4Q9NY91 659 aa14.27□□□□□ -0.13
SMPD4-217ENST00000473720 PATL2C9JE40 543 aaKnown RBP14.26□□□□□ -0.13
SMPD4-217ENST00000473720 PGK2P07205 417 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 CYBAP13498 195 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 MX1P20591 662 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 GJC2Q5T442 439 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-217ENST00000473720 GIMAP6Q6P9H5 292 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 IFNL3Q8IZI9 196 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 PRO3102Q9H379 93 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 PPP1R9AQ9ULJ8 1098 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 CTDP1Q9Y5B0 961 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-217ENST00000473720 LTBP2Q14767 1821 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 DNAH12Q6ZR08 3092 aa14.26□□□□□ -0.13
SMPD4-217ENST00000473720 MYH6P13533 1939 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 ROBO3Q96MS0 1386 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 F5H6K3 240 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 VWA5AO00534 786 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 MSCO60682 206 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 SLC25A27O95847 323 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 STAT3P40763 770 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 MAGEA10P43363 369 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-217ENST00000473720 KLRC3Q07444 240 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 FAM47AQ5JRC9 791 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 OLFML2BQ68BL8 750 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 NACAP1Q9BZK3 213 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 NAPBQ9H115 298 aa14.25□□□□□ -0.13
SMPD4-217ENST00000473720 NDUFB10O96000 172 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 TSPY3P0CV98 308 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 TSPY8P0CW00 308 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 COL6A1P12109 1028 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 MDM2Q00987 491 aaPredicted RBP14.24□□□□□ -0.13
SMPD4-217ENST00000473720 RIOX2Q8IUF8 465 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 CPXCR1Q8N123 301 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 LRRC47Q8N1G4 583 aaKnown RBP14.24□□□□□ -0.13
SMPD4-217ENST00000473720 KIFC2Q96AC6 838 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 LRCH3Q96II8 777 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 SLF1Q9BQI6 1058 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 ZNF287Q9HBT7 754 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
SMPD4-217ENST00000473720 SZT2Q5T011 3432 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 KBTBD13C9JR72 458 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 SOX1O00570 391 aaPredicted RBP14.23□□□□□ -0.13
SMPD4-217ENST00000473720 CTDSPL2Q05D32 466 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 PDE4BQ07343 736 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 KCTD2Q14681 263 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 ZMYM1Q5SVZ6 1142 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 SNRNP48Q6IEG0 339 aaKnown RBP14.23□□□□□ -0.13
SMPD4-217ENST00000473720 ABRAQ8N0Z2 381 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 GDF15Q99988 308 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 UBE2OQ9C0C9 1292 aaKnown RBP14.23□□□□□ -0.13
SMPD4-217ENST00000473720 ADAMTS5Q9UNA0 930 aa14.23□□□□□ -0.13
SMPD4-217ENST00000473720 DNM1LO00429 736 aa14.22□□□□□ -0.13
SMPD4-217ENST00000473720 SEPT4O43236 478 aa14.22□□□□□ -0.13
SMPD4-217ENST00000473720 SLC3A2P08195 630 aaKnown RBP14.22□□□□□ -0.13
SMPD4-217ENST00000473720 TFAP4Q01664 338 aa14.22□□□□□ -0.13
SMPD4-217ENST00000473720 PPARAQ07869 468 aa14.22□□□□□ -0.13
SMPD4-217ENST00000473720 IKQ13123 557 aaPredicted RBP14.22□□□□□ -0.13
SMPD4-217ENST00000473720 ARRDC4Q8NCT1 418 aa14.22□□□□□ -0.13
SMPD4-217ENST00000473720 REPS2Q8NFH8 660 aa14.22□□□□□ -0.13
SMPD4-217ENST00000473720 RAVER2Q9HCJ3 691 aaKnown RBP14.22□□□□□ -0.13
SMPD4-217ENST00000473720 ZNF214Q9UL59 606 aaPredicted RBP14.22□□□□□ -0.13
SMPD4-217ENST00000473720 MTMR7Q9Y216 660 aa14.22□□□□□ -0.13
SMPD4-217ENST00000473720 ATP11BQ9Y2G3 1177 aa14.22□□□□□ -0.13
SMPD4-217ENST00000473720 IGKV6D-41A0A0C4DH26 115 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 ZBED4O75132 1171 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 TTLL1O95922 423 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms