RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 BCL11AQ9H165 835 aa10.29□□□□□ -0.76
A1CF-209ENST00000473480 PCDHA4Q9UN74 947 aa10.29□□□□□ -0.76
A1CF-209ENST00000473480 TNS3Q68CZ2 1445 aa10.29□□□□□ -0.76
A1CF-209ENST00000473480 RRBP1Q9P2E9 1410 aaKnown RBP10.29□□□□□ -0.76
A1CF-209ENST00000473480 ADCY9O60503 1353 aa10.28□□□□□ -0.76
A1CF-209ENST00000473480 USP31Q70CQ4 1352 aa10.28□□□□□ -0.76
A1CF-209ENST00000473480 ROBO2Q9HCK4 1378 aa10.28□□□□□ -0.76
A1CF-209ENST00000473480 F13BP05160 661 aa10.28□□□□□ -0.76
A1CF-209ENST00000473480 RLBP1P12271 317 aa10.28□□□□□ -0.76
A1CF-209ENST00000473480 YBX3P16989 372 aaKnown RBP eCLIP10.28□□□□□ -0.76
A1CF-209ENST00000473480 LMNB1P20700 586 aa10.28□□□□□ -0.76
A1CF-209ENST00000473480 MFAP1P55081 439 aaKnown RBP10.28□□□□□ -0.76
A1CF-209ENST00000473480 CPSF6Q16630 551 aaKnown RBP eCLIP10.28□□□□□ -0.76
A1CF-209ENST00000473480 METTL22Q9BUU2 404 aaPredicted RBP10.28□□□□□ -0.76
A1CF-209ENST00000473480 NOC4LQ9BVI4 516 aaKnown RBP10.28□□□□□ -0.76
A1CF-209ENST00000473480 COL14A1Q05707 1796 aaKnown RBP10.28□□□□□ -0.76
A1CF-209ENST00000473480 ARHGEF10O15013 1369 aa10.27□□□□□ -0.76
A1CF-209ENST00000473480 PRR19A6NJB7 356 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 RNGTTO60942 597 aaKnown RBP10.27□□□□□ -0.77
A1CF-209ENST00000473480 COBLO75128 1261 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 HSPA1AP0DMV8 641 aaKnown RBP10.27□□□□□ -0.77
A1CF-209ENST00000473480 HSPA1BP0DMV9 641 aaKnown RBP10.27□□□□□ -0.77
A1CF-209ENST00000473480 HCLS1P14317 486 aaPredicted RBP10.27□□□□□ -0.77
A1CF-209ENST00000473480 ADMP35318 185 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 GRIK1P39086 918 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 SEZ6L2Q6UXD5 910 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 RNF214Q8ND24 703 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 OSBPL1AQ9BXW6 950 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 ZFP64Q9NPA5 681 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 ABCA3Q99758 1704 aa10.27□□□□□ -0.77
A1CF-209ENST00000473480 HFM1A2PYH4 1435 aa10.26□□□□□ -0.77
A1CF-209ENST00000473480 HTRA3P83110 453 aa10.26□□□□□ -0.77
A1CF-209ENST00000473480 INTS5Q6P9B9 1019 aaKnown RBP10.26□□□□□ -0.77
A1CF-209ENST00000473480 GATA6Q92908 595 aa10.26□□□□□ -0.77
A1CF-209ENST00000473480 LGR6Q9HBX8 967 aa10.26□□□□□ -0.77
A1CF-209ENST00000473480 C1GALT1Q9NS00 363 aa10.26□□□□□ -0.77
A1CF-209ENST00000473480 PCOLCE2Q9UKZ9 415 aa10.26□□□□□ -0.77
A1CF-209ENST00000473480 DYNC1LI2O43237 492 aaPredicted RBP10.25□□□□□ -0.77
A1CF-209ENST00000473480 POLD1P28340 1107 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 CD97P48960 835 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 LIG3P49916 1009 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 CYP27A1Q02318 531 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 AGMOQ6ZNB7 445 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 PICK1Q9NRD5 415 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 PIM2Q9P1W9 311 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 LEMD3Q9Y2U8 911 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 CDC42BPGQ6DT37 1551 aa10.25□□□□□ -0.77
A1CF-209ENST00000473480 DCDC2CA8MYV0 355 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 HYAL3O43820 417 aaPredicted RBP10.24□□□□□ -0.77
A1CF-209ENST00000473480 NEFMP07197 916 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 SSTR4P31391 388 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 NLGN2Q8NFZ4 835 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 GAL3ST3Q96A11 431 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 ISL2Q96A47 359 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 ELMO3Q96BJ8 720 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 SSU72Q9NP77 194 aaKnown RBP10.24□□□□□ -0.77
A1CF-209ENST00000473480 USP35Q9P2H5 1018 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 CSADQ9Y600 493 aa10.24□□□□□ -0.77
A1CF-209ENST00000473480 KIF1AQ12756 1690 aa10.23□□□□□ -0.77
A1CF-209ENST00000473480 PTPN11Q06124 597 aaPredicted RBP10.23□□□□□ -0.77
A1CF-209ENST00000473480 TRIM26Q12899 539 aaPredicted RBP10.23□□□□□ -0.77
A1CF-209ENST00000473480 PPM1JQ5JR12 505 aa10.23□□□□□ -0.77
A1CF-209ENST00000473480 DUSP27Q5VZP5 1158 aa10.23□□□□□ -0.77
A1CF-209ENST00000473480 C12orf40Q86WS4 652 aa10.23□□□□□ -0.77
A1CF-209ENST00000473480 SHISA5Q8N114 240 aa10.23□□□□□ -0.77
A1CF-209ENST00000473480 PCMTD2Q9NV79 361 aa10.23□□□□□ -0.77
A1CF-209ENST00000473480 SBNO1A3KN83 1393 aa10.23□□□□□ -0.77
A1CF-209ENST00000473480 IQGAP3Q86VI3 1631 aa10.22□□□□□ -0.77
A1CF-209ENST00000473480 FAM170BA6NMN3 283 aa10.22□□□□□ -0.77
A1CF-209ENST00000473480 FANCGO15287 622 aa10.22□□□□□ -0.77
A1CF-209ENST00000473480 RING1Q06587 406 aa10.22□□□□□ -0.77
A1CF-209ENST00000473480 HDXQ7Z353 690 aa10.22□□□□□ -0.77
A1CF-209ENST00000473480 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.22□□□□□ -0.77
A1CF-209ENST00000473480 MIR1-1HGQ9H1L0 117 aa10.22□□□□□ -0.77
A1CF-209ENST00000473480 TXNRD1Q16881 649 aa10.21□□□□□ -0.77
A1CF-209ENST00000473480 OGFOD3Q6PK18 319 aa10.21□□□□□ -0.77
A1CF-209ENST00000473480 PRDM11Q9NQV5 511 aa10.21□□□□□ -0.77
A1CF-209ENST00000473480 PCDHB5Q9Y5E4 795 aa10.21□□□□□ -0.77
A1CF-209ENST00000473480 SNCAIPQ9Y6H5 919 aa10.21□□□□□ -0.77
A1CF-209ENST00000473480 DHX57Q6P158 1386 aaKnown RBP10.21□□□□□ -0.78
A1CF-209ENST00000473480 KIAA1324LA8MWY0 1029 aaPredicted RBP10.2□□□□□ -0.78
A1CF-209ENST00000473480 TECPR2O15040 1411 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 FOSL1P15407 271 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 CDK5R2Q13319 367 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 INPP5AQ14642 412 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 ZBTB37Q5TC79 503 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 LRFN4Q6PJG9 635 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 ZNF765Q7L2R6 523 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 PLPPR2Q96GM1 343 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 ANKRD30AQ9BXX3 1397 aa10.2□□□□□ -0.78
A1CF-209ENST00000473480 OVOS2A0A0G2JMS6 1433 aa10.19□□□□□ -0.78
A1CF-209ENST00000473480 OVOS2A0A0J9YW53 1432 aa10.19□□□□□ -0.78
A1CF-209ENST00000473480 OVOS2Q6IE36 1432 aa10.19□□□□□ -0.78
A1CF-209ENST00000473480 MED26O95402 600 aa10.19□□□□□ -0.78
A1CF-209ENST00000473480 ZNF16P17020 682 aaPredicted RBP10.19□□□□□ -0.78
A1CF-209ENST00000473480 TFE3P19532 575 aaPredicted RBP10.19□□□□□ -0.78
A1CF-209ENST00000473480 NTF4P34130 210 aa10.19□□□□□ -0.78
A1CF-209ENST00000473480 SEPT6Q14141 434 aa10.19□□□□□ -0.78
A1CF-209ENST00000473480 MRPL58Q14197 206 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms