RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 ABRAQ8N0Z2 381 aa24.73■■□□□ 1.55
EPHB3-202ENST00000473079 EXOC6Q8TAG9 804 aa24.73■■□□□ 1.55
EPHB3-202ENST00000473079 PAWRQ96IZ0 340 aaKnown RBP24.73■■□□□ 1.55
EPHB3-202ENST00000473079 LNPKQ9C0E8 428 aa24.73■■□□□ 1.55
EPHB3-202ENST00000473079 PPP1R9AQ9ULJ8 1098 aa24.73■■□□□ 1.55
EPHB3-202ENST00000473079 SLC25A27O95847 323 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 IGHDP01880 384 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 TMEM132BQ14DG7 1078 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 FAM83BQ5T0W9 1011 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 NEDD1Q8NHV4 660 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 FBXO28Q9NVF7 368 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 MTMR4Q9NYA4 1195 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 FLRT1Q9NZU1 646 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 CLIP2Q9UDT6 1046 aa24.72■■□□□ 1.55
EPHB3-202ENST00000473079 PLIN4Q96Q06 1357 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 VWA5AO00534 786 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 ADORA2AP29274 412 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 MNX1P50219 401 aaPredicted RBP24.71■■□□□ 1.55
EPHB3-202ENST00000473079 NUCB1Q02818 461 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 PLS1Q14651 629 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 CCDC129Q6ZRS4 1044 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 DPP9Q86TI2 863 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 CHD1LQ86WJ1 897 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 NPLOC4Q8TAT6 608 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 CEP95Q96GE4 821 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 NR2E3Q9Y5X4 410 aa24.71■■□□□ 1.55
EPHB3-202ENST00000473079 TTLL1O95922 423 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 CCND3P30281 292 aaPredicted RBP24.7■■□□□ 1.54
EPHB3-202ENST00000473079 ALX1Q15699 326 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 OLFML2BQ68BL8 750 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 LHX8Q68G74 356 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 NCAPG2Q86XI2 1143 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 RIOX2Q8IUF8 465 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 NBPF3Q9H094 633 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 OSBPL3Q9H4L5 887 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 ANAPC4Q9UJX5 808 aa24.7■■□□□ 1.54
EPHB3-202ENST00000473079 RAD21O60216 631 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 NDUFB10O96000 172 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 TSPY3P0CV98 308 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 TSPY8P0CW00 308 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 MCMDC2Q4G0Z9 681 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 HABP4Q5JVS0 413 aaKnown RBP24.69■■□□□ 1.54
EPHB3-202ENST00000473079 B4GALNT3Q6L9W6 998 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 REPS2Q8NFH8 660 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 SLC5A4Q9NY91 659 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 ZNF236Q9UL36 1845 aa24.69■■□□□ 1.54
EPHB3-202ENST00000473079 PARP14Q460N5 1801 aa24.68■■□□□ 1.54
EPHB3-202ENST00000473079 COPB2P35606 906 aa24.68■■□□□ 1.54
EPHB3-202ENST00000473079 STAT3P40763 770 aa24.68■■□□□ 1.54
EPHB3-202ENST00000473079 TFAP4Q01664 338 aa24.68■■□□□ 1.54
EPHB3-202ENST00000473079 VPS53Q5VIR6 699 aa24.68■■□□□ 1.54
EPHB3-202ENST00000473079 SAMD1Q6SPF0 538 aaPredicted RBP24.68■■□□□ 1.54
EPHB3-202ENST00000473079 PRPF38AQ8NAV1 312 aaKnown RBP24.68■■□□□ 1.54
EPHB3-202ENST00000473079 GMCL1P1Q8NEA9 526 aa24.68■■□□□ 1.54
EPHB3-202ENST00000473079 DIS3LQ8TF46 1054 aaKnown RBP24.68■■□□□ 1.54
EPHB3-202ENST00000473079 SLF1Q9BQI6 1058 aa24.68■■□□□ 1.54
EPHB3-202ENST00000473079 ZNF214Q9UL59 606 aaPredicted RBP24.68■■□□□ 1.54
EPHB3-202ENST00000473079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.68■■□□□ 1.54
EPHB3-202ENST00000473079 COBLO75128 1261 aa24.67■■□□□ 1.54
EPHB3-202ENST00000473079 FCER1AP12319 257 aa24.67■■□□□ 1.54
EPHB3-202ENST00000473079 PPP4R3BQ5MIZ7 849 aa24.67■■□□□ 1.54
EPHB3-202ENST00000473079 PLEKHM2Q8IWE5 1019 aa24.67■■□□□ 1.54
EPHB3-202ENST00000473079 NUP88Q99567 741 aaPredicted RBP24.67■■□□□ 1.54
EPHB3-202ENST00000473079 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
EPHB3-202ENST00000473079 MSCO60682 206 aa24.66■■□□□ 1.54
EPHB3-202ENST00000473079 FGRP09769 529 aa24.66■■□□□ 1.54
EPHB3-202ENST00000473079 CYP2C19P33261 490 aa24.66■■□□□ 1.54
EPHB3-202ENST00000473079 FAM47AQ5JRC9 791 aa24.66■■□□□ 1.54
EPHB3-202ENST00000473079 FAM227BQ96M60 508 aa24.66■■□□□ 1.54
EPHB3-202ENST00000473079 COLQQ9Y215 455 aaPredicted RBP24.66■■□□□ 1.54
EPHB3-202ENST00000473079 A0A0D9SFI3 127 aa24.65■■□□□ 1.54
EPHB3-202ENST00000473079 TRIM6-TRIM34B2RNG4 842 aa24.65■■□□□ 1.54
EPHB3-202ENST00000473079 EVI5O60447 810 aa24.65■■□□□ 1.54
EPHB3-202ENST00000473079 ATP2A1O14983 1001 aa24.64■■□□□ 1.54
EPHB3-202ENST00000473079 FGAP02671 866 aa24.64■■□□□ 1.54
EPHB3-202ENST00000473079 CTDSPL2Q05D32 466 aa24.64■■□□□ 1.54
EPHB3-202ENST00000473079 TEX13BQ9BXU2 312 aa24.64■■□□□ 1.54
EPHB3-202ENST00000473079 C11orf49Q9H6J7 331 aa24.64■■□□□ 1.54
EPHB3-202ENST00000473079 FEM1BQ9UK73 627 aa24.64■■□□□ 1.54
EPHB3-202ENST00000473079 ZMYM6O95789 1325 aa24.63■■□□□ 1.53
EPHB3-202ENST00000473079 ORC4O43929 436 aa24.63■■□□□ 1.53
EPHB3-202ENST00000473079 COL6A1P12109 1028 aa24.63■■□□□ 1.53
EPHB3-202ENST00000473079 CYBAP13498 195 aa24.63■■□□□ 1.53
EPHB3-202ENST00000473079 NMIQ13287 307 aaPredicted RBP24.63■■□□□ 1.53
EPHB3-202ENST00000473079 TRPV1Q8NER1 839 aa24.63■■□□□ 1.53
EPHB3-202ENST00000473079 RILPL2Q969X0 211 aa24.63■■□□□ 1.53
EPHB3-202ENST00000473079 MAML3Q96JK9 1138 aa24.63■■□□□ 1.53
EPHB3-202ENST00000473079 MMP19Q99542 508 aa24.63■■□□□ 1.53
EPHB3-202ENST00000473079 DDX20Q9UHI6 824 aaKnown RBP24.63■■□□□ 1.53
EPHB3-202ENST00000473079 DIS3Q9Y2L1 958 aaKnown RBP24.63■■□□□ 1.53
EPHB3-202ENST00000473079 HSPD1P10809 573 aaKnown RBP24.62■■□□□ 1.53
EPHB3-202ENST00000473079 SDSP20132 328 aa24.62■■□□□ 1.53
EPHB3-202ENST00000473079 NOVP48745 357 aa24.62■■□□□ 1.53
EPHB3-202ENST00000473079 KCTD2Q14681 263 aa24.62■■□□□ 1.53
EPHB3-202ENST00000473079 SLFN13Q68D06 897 aa24.62■■□□□ 1.53
EPHB3-202ENST00000473079 LRRC47Q8N1G4 583 aaKnown RBP24.62■■□□□ 1.53
EPHB3-202ENST00000473079 GMCL1Q96IK5 515 aa24.62■■□□□ 1.53
EPHB3-202ENST00000473079 INCENPQ9NQS7 918 aa24.62■■□□□ 1.53
EPHB3-202ENST00000473079 TSPY2A6NKD2 308 aa24.61■■□□□ 1.53
EPHB3-202ENST00000473079 ZBED4O75132 1171 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms