RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 NEK1Q96PY6 1258 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 NUP88Q99567 741 aaPredicted RBP24.4■■□□□ 1.5
TOP3A-204ENST00000472959 KAT14Q9H8E8 782 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 MORF4L1Q9UBU8 362 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 RABGAP1Q9Y3P9 1069 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 SPDYE16A6NNV3 312 aaPredicted RBP24.39■■□□□ 1.49
TOP3A-204ENST00000472959 DSG3P32926 999 aa24.39■■□□□ 1.49
TOP3A-204ENST00000472959 KIF22Q14807 665 aa24.39■■□□□ 1.49
TOP3A-204ENST00000472959 IFIT1BQ5T764 474 aaKnown RBP24.39■■□□□ 1.49
TOP3A-204ENST00000472959 MB21D1Q8N884 522 aa24.39■■□□□ 1.49
TOP3A-204ENST00000472959 RBPJLQ9UBG7 517 aa24.39■■□□□ 1.49
TOP3A-204ENST00000472959 FEM1BQ9UK73 627 aa24.39■■□□□ 1.49
TOP3A-204ENST00000472959 HMGB1P09429 215 aaKnown RBP24.38■■□□□ 1.49
TOP3A-204ENST00000472959 ANTXR2P58335 489 aa24.38■■□□□ 1.49
TOP3A-204ENST00000472959 LACTBP83111 547 aaPredicted RBP24.38■■□□□ 1.49
TOP3A-204ENST00000472959 PNMA1Q8ND90 353 aa24.38■■□□□ 1.49
TOP3A-204ENST00000472959 GPRC5AQ8NFJ5 357 aa24.38■■□□□ 1.49
TOP3A-204ENST00000472959 SLF1Q9BQI6 1058 aa24.38■■□□□ 1.49
TOP3A-204ENST00000472959 PPP1R9AQ9ULJ8 1098 aa24.38■■□□□ 1.49
TOP3A-204ENST00000472959 PRC1O43663 620 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 PLA2G6O60733 806 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 TMEM67Q5HYA8 995 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 CHST3Q7LGC8 479 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 PRPF38AQ8NAV1 312 aaKnown RBP24.37■■□□□ 1.49
TOP3A-204ENST00000472959 IGDCC4Q8TDY8 1250 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 CHURC1Q8WUH1 139 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 TMEM87BQ96K49 555 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 FBXO28Q9NVF7 368 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 ADAMTS5Q9UNA0 930 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 SNX14Q9Y5W7 946 aa24.37■■□□□ 1.49
TOP3A-204ENST00000472959 WDR19Q8NEZ3 1342 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 SNHG28P0DPA3 235 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 WTAPQ15007 396 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 POTEEQ6S8J3 1075 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 FAM160B2Q86V87 743 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 TMTC2Q8N394 836 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 CD99L2Q8TCZ2 262 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 PAGR1Q9BTK6 254 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 TXNRD2Q9NNW7 524 aa24.36■■□□□ 1.49
TOP3A-204ENST00000472959 TMEM232C9JQI7 657 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 GNRH1P01148 92 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 PDHBP11177 359 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 STAT2P52630 851 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 ERVK-9P63128 1117 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 ERVK-24P63145 666 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 CCDC96Q2M329 555 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 ADCK5Q3MIX3 580 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 C8orf34Q49A92 452 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 DHX32Q7L7V1 743 aaKnown RBP24.35■■□□□ 1.49
TOP3A-204ENST00000472959 ATG4CQ96DT6 458 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 ISY1Q9ULR0 285 aaKnown RBP24.35■■□□□ 1.49
TOP3A-204ENST00000472959 MTMR7Q9Y216 660 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 MYH4Q9Y623 1939 aa24.35■■□□□ 1.49
TOP3A-204ENST00000472959 PSMA5P28066 241 aa24.34■■□□□ 1.49
TOP3A-204ENST00000472959 CCNA1P78396 465 aa24.34■■□□□ 1.49
TOP3A-204ENST00000472959 KCTD1Q719H9 257 aa24.34■■□□□ 1.49
TOP3A-204ENST00000472959 CTU1Q7Z7A3 348 aaKnown RBP24.34■■□□□ 1.49
TOP3A-204ENST00000472959 VWA5AO00534 786 aa24.33■■□□□ 1.49
TOP3A-204ENST00000472959 CNMDO75829 334 aa24.33■■□□□ 1.49
TOP3A-204ENST00000472959 FDX1P10109 184 aa24.33■■□□□ 1.49
TOP3A-204ENST00000472959 PSMC4P43686 418 aa24.33■■□□□ 1.49
TOP3A-204ENST00000472959 FCGRTP55899 365 aa24.33■■□□□ 1.49
TOP3A-204ENST00000472959 EXOSC10Q01780 885 aaKnown RBP24.33■■□□□ 1.49
TOP3A-204ENST00000472959 ZNF543Q08ER8 600 aa24.33■■□□□ 1.49
TOP3A-204ENST00000472959 GPATCH4Q5T3I0 446 aaKnown RBP24.33■■□□□ 1.49
TOP3A-204ENST00000472959 SAMD1Q6SPF0 538 aaPredicted RBP24.33■■□□□ 1.49
TOP3A-204ENST00000472959 JAKMIP1Q96N16 626 aaKnown RBP24.33■■□□□ 1.49
TOP3A-204ENST00000472959 EFCC1Q9HA90 598 aa24.33■■□□□ 1.49
TOP3A-204ENST00000472959 BTBD7Q9P203 1132 aa24.33■■□□□ 1.49
TOP3A-204ENST00000472959 SH2B2O14492 632 aaPredicted RBP24.32■■□□□ 1.48
TOP3A-204ENST00000472959 LIFRP42702 1097 aa24.32■■□□□ 1.48
TOP3A-204ENST00000472959 IKQ13123 557 aaPredicted RBP24.32■■□□□ 1.48
TOP3A-204ENST00000472959 BTNL9Q6UXG8 535 aa24.32■■□□□ 1.48
TOP3A-204ENST00000472959 KIFC2Q96AC6 838 aa24.32■■□□□ 1.48
TOP3A-204ENST00000472959 CHMP4CQ96CF2 233 aa24.32■■□□□ 1.48
TOP3A-204ENST00000472959 LY9Q9HBG7 655 aa24.32■■□□□ 1.48
TOP3A-204ENST00000472959 ZBED4O75132 1171 aa24.31■■□□□ 1.48
TOP3A-204ENST00000472959 FMNL1O95466 1100 aaPredicted RBP24.31■■□□□ 1.48
TOP3A-204ENST00000472959 COL9A3Q14050 684 aaPredicted RBP24.31■■□□□ 1.48
TOP3A-204ENST00000472959 Q3C1V9 767 aa24.31■■□□□ 1.48
TOP3A-204ENST00000472959 ASPRV1Q53RT3 343 aa24.31■■□□□ 1.48
TOP3A-204ENST00000472959 CATIPQ7Z7H3 387 aa24.31■■□□□ 1.48
TOP3A-204ENST00000472959 CCAR1Q8IX12 1150 aaKnown RBP24.31■■□□□ 1.48
TOP3A-204ENST00000472959 TRIM47Q96LD4 638 aa24.31■■□□□ 1.48
TOP3A-204ENST00000472959 ARHGAP39Q9C0H5 1083 aa24.31■■□□□ 1.48
TOP3A-204ENST00000472959 PEX10O60683 326 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 SEC24BO95487 1268 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 HOXD10P28358 340 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 MAPK4P31152 587 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 ANAPC15P60006 121 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 PKN2Q16513 984 aaKnown RBP24.3■■□□□ 1.48
TOP3A-204ENST00000472959 BLOC1S2Q6QNY1 142 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 RASGRP2Q7LDG7 609 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 OTOP1Q7RTM1 612 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 SPATC1LQ9H0A9 340 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 SENP2Q9HC62 589 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 GPCPD1Q9NPB8 672 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 TRIM17Q9Y577 477 aa24.3■■□□□ 1.48
TOP3A-204ENST00000472959 CTDP1Q9Y5B0 961 aaPredicted RBP24.3■■□□□ 1.48
TOP3A-204ENST00000472959 FRMPD2Q68DX3 1309 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms