RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	SHCBP1	Q8NEM2	672 aa		10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	ATG4C	Q96DT6	458 aa		10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	YTHDC1	Q96MU7	727 aa	Known RBP	10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	CRBN	Q96SW2	442 aa		10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	MROH8	Q9H579	483 aa		10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	SLC5A4	Q9NY91	659 aa		10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	ALPK3	Q96L96	1907 aa		10.66	□□□□□ -0.7
CHEK2-223	ENST00000472807	RASA1	P20936	1047 aa		10.65	□□□□□ -0.7
CHEK2-223	ENST00000472807	CCND3	P30281	292 aa	Predicted RBP	10.65	□□□□□ -0.7
CHEK2-223	ENST00000472807	DPP9	Q86TI2	863 aa		10.65	□□□□□ -0.7
CHEK2-223	ENST00000472807	NCAPG2	Q86XI2	1143 aa		10.65	□□□□□ -0.7
CHEK2-223	ENST00000472807	STK11IP	Q8N1F8	1099 aa		10.65	□□□□□ -0.7
CHEK2-223	ENST00000472807	FLRT1	Q9NZU1	646 aa		10.65	□□□□□ -0.7
CHEK2-223	ENST00000472807	PCDH10	Q9P2E7	1040 aa		10.65	□□□□□ -0.7
CHEK2-223	ENST00000472807	FRMPD3	Q5JV73	1810 aa		10.65	□□□□□ -0.71
CHEK2-223	ENST00000472807	LAMA2	P24043	3122 aa	Known RBP	10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	COL11A1	P12107	1806 aa	Predicted RBP	10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	PATL2	C9JE40	543 aa	Known RBP	10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	MSC	O60682	206 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	SLC25A27	O95847	323 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	SLC3A2	P08195	630 aa	Known RBP	10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	FXR1	P51114	621 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	FAM83B	Q5T0W9	1011 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	ANKRD45	Q5TZF3	282 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	OLFML2B	Q68BL8	750 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	C7orf61	Q8IZ16	206 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	ABRA	Q8N0Z2	381 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	NPLOC4	Q8TAT6	608 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	NAPB	Q9H115	298 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	PPP1R9A	Q9ULJ8	1098 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	MYH4	Q9Y623	1939 aa		10.64	□□□□□ -0.71
CHEK2-223	ENST00000472807	PRDM1	O75626	825 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	FCER1A	P12319	257 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	CNGA1	P29973	690 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	CYP2C19	P33261	490 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	COPB2	P35606	906 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	MNX1	P50219	401 aa	Predicted RBP	10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	PDE4B	Q07343	736 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	HDAC1	Q13547	482 aa	Predicted RBP	10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	AAMP	Q13685	434 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	TMEM132B	Q14DG7	1078 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	ZMYM1	Q5SVZ6	1142 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	LHX8	Q68G74	356 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	IFNL3	Q8IZI9	196 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	SEC62	Q99442	399 aa	Known RBP	10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	FBXO28	Q9NVF7	368 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	NYAP2	Q9P242	653 aa		10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	RBM27	Q9P2N5	1060 aa	Known RBP	10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	DDX20	Q9UHI6	824 aa	Known RBP	10.63	□□□□□ -0.71
CHEK2-223	ENST00000472807	PFAS	O15067	1338 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	SALL3	Q9BXA9	1300 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	VWA5A	O00534	786 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	TSPY3	P0CV98	308 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	TSPY8	P0CW00	308 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	CYBA	P13498	195 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	KCTD2	Q14681	263 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	RIOX2	Q8IUF8	465 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	EVI5L	Q96CN4	794 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	MMP19	Q99542	508 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	SLF1	Q9BQI6	1058 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	CLIP2	Q9UDT6	1046 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	SYNPO2	Q9UMS6	1093 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	ADAMTS5	Q9UNA0	930 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	PLIN4	Q96Q06	1357 aa		10.62	□□□□□ -0.71
CHEK2-223	ENST00000472807	IGKV6D-41	A0A0C4DH26	115 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807		A0A1W2PPC1	479 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807		F5H6K3	240 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	COBL	O75128	1261 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	TTLL1	O95922	423 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	NDUFB10	O96000	172 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	COL6A1	P12109	1028 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	STAT3	P40763	770 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	KLRC3	Q07444	240 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	PPARA	Q07869	468 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	PPP4R3B	Q5MIZ7	849 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	CEP95	Q96GE4	821 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	NUP88	Q99567	741 aa	Predicted RBP	10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	TEX13B	Q9BXU2	312 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	PRO3102	Q9H379	93 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	MTMR4	Q9NYA4	1195 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	STAP2	Q9UGK3	403 aa		10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	ZNF214	Q9UL59	606 aa	Predicted RBP	10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.61	□□□□□ -0.71
CHEK2-223	ENST00000472807	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	PLXNA1	Q9UIW2	1896 aa		10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	DNM1L	O00429	736 aa		10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	ZBED4	O75132	1171 aa		10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	IGHA2	P01877	340 aa		10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	PDE1A	P54750	535 aa		10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	SNRNP48	Q6IEG0	339 aa	Known RBP	10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	CCDC129	Q6ZRS4	1044 aa		10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	LRRC47	Q8N1G4	583 aa	Known RBP	10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	PRPF38A	Q8NAV1	312 aa	Known RBP	10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	GMCL1P1	Q8NEA9	526 aa		10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	TRPV1	Q8NER1	839 aa		10.6	□□□□□ -0.71
CHEK2-223	ENST00000472807	REPS2	Q8NFH8	660 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms