RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 GSPT1P15170 499 aaKnown RBP17.04■□□□□ 0.32
ABCF3-209ENST00000472608 SDSP20132 328 aa17.04■□□□□ 0.32
ABCF3-209ENST00000472608 CYP2C19P33261 490 aa17.04■□□□□ 0.32
ABCF3-209ENST00000472608 ATP2B2Q01814 1243 aa17.04■□□□□ 0.32
ABCF3-209ENST00000472608 SHROOM1Q2M3G4 852 aaPredicted RBP17.04■□□□□ 0.32
ABCF3-209ENST00000472608 GJC2Q5T442 439 aaPredicted RBP17.04■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L2Q6R6M4 530 aa17.04■□□□□ 0.32
ABCF3-209ENST00000472608 USP38Q8NB14 1042 aa17.04■□□□□ 0.32
ABCF3-209ENST00000472608 NPLOC4Q8TAT6 608 aa17.04■□□□□ 0.32
ABCF3-209ENST00000472608 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
ABCF3-209ENST00000472608 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
ABCF3-209ENST00000472608 SAP30BPQ9UHR5 308 aaKnown RBP17.04■□□□□ 0.32
ABCF3-209ENST00000472608 SERPINB13Q9UIV8 391 aa17.04■□□□□ 0.32
ABCF3-209ENST00000472608 GSG1L2A8MUP6 293 aa17.03■□□□□ 0.32
ABCF3-209ENST00000472608 M0R2C6 588 aa17.03■□□□□ 0.32
ABCF3-209ENST00000472608 CNGA1P29973 690 aa17.03■□□□□ 0.32
ABCF3-209ENST00000472608 MCMDC2Q4G0Z9 681 aa17.03■□□□□ 0.32
ABCF3-209ENST00000472608 SBK1Q52WX2 424 aa17.03■□□□□ 0.32
ABCF3-209ENST00000472608 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-209ENST00000472608 SEC62Q99442 399 aaKnown RBP17.03■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L15C9J2P7 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L13C9JLJ4 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L11C9JVI0 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L18D6R9N7 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L22D6RA61 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L17D6RBQ6 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L19D6RCP7 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L20D6RJB6 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 PLA2G5P39877 138 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 PLCD1P51178 756 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 GABPAQ06546 454 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 USP17L24Q0WX57 530 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 GRIN2CQ14957 1233 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 TRIM60Q495X7 471 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 C12orf60Q5U649 245 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 OLFML2BQ68BL8 750 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 TATDN1Q6P1N9 297 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 CATSPERGQ6ZRH7 1159 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 AMOTL1Q8IY63 956 aa17.02■□□□□ 0.32
ABCF3-209ENST00000472608 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
ABCF3-209ENST00000472608 PRDM5Q9NQX1 630 aaPredicted RBP17.02■□□□□ 0.32
ABCF3-209ENST00000472608 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
ABCF3-209ENST00000472608 GDF11O95390 407 aa17.01■□□□□ 0.31
ABCF3-209ENST00000472608 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
ABCF3-209ENST00000472608 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
ABCF3-209ENST00000472608 NACAP1Q9BZK3 213 aa17.01■□□□□ 0.31
ABCF3-209ENST00000472608 BTBD7Q9P203 1132 aa17.01■□□□□ 0.31
ABCF3-209ENST00000472608 ARPP21Q9UBL0 812 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-209ENST00000472608 RAPGEFL1Q9UHV5 662 aa17.01■□□□□ 0.31
ABCF3-209ENST00000472608 A0A0D9SFI3 127 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 USP17L12C9JPN9 530 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 USP17L21D6R901 530 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 SEPT4O43236 478 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 ITGB8P26012 769 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 EPHB4P54760 987 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
ABCF3-209ENST00000472608 ALX1Q15699 326 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 CTR9Q6PD62 1173 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 IFNL3Q8IZI9 196 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
ABCF3-209ENST00000472608 RNPC3Q96LT9 517 aaKnown RBP17■□□□□ 0.31
ABCF3-209ENST00000472608 FAM227BQ96M60 508 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 SWAP70Q9UH65 585 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 BDP1A6H8Y1 2624 aa17■□□□□ 0.31
ABCF3-209ENST00000472608 NAV1Q8NEY1 1877 aa16.99■□□□□ 0.31
ABCF3-209ENST00000472608 KIAA1683Q9H0B3 1180 aa16.99■□□□□ 0.31
ABCF3-209ENST00000472608 TACC3Q9Y6A5 838 aa16.99■□□□□ 0.31
ABCF3-209ENST00000472608 IVNS1ABPQ9Y6Y0 642 aa16.99■□□□□ 0.31
ABCF3-209ENST00000472608 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-209ENST00000472608 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-209ENST00000472608 KIAA0355O15063 1070 aa16.98■□□□□ 0.31
ABCF3-209ENST00000472608 STRNO43815 780 aa16.98■□□□□ 0.31
ABCF3-209ENST00000472608 APPP05067 770 aa16.98■□□□□ 0.31
ABCF3-209ENST00000472608 DNAJB2P25686 324 aa16.98■□□□□ 0.31
ABCF3-209ENST00000472608 ADCYAP1R1P41586 468 aa16.98■□□□□ 0.31
ABCF3-209ENST00000472608 TLE2Q04725 743 aa16.98■□□□□ 0.31
ABCF3-209ENST00000472608 LRRC41Q15345 812 aa16.98■□□□□ 0.31
ABCF3-209ENST00000472608 BMP2KLQ5H9B9 411 aa16.98■□□□□ 0.31
ABCF3-209ENST00000472608 EPB41L4AQ9HCS5 686 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-209ENST00000472608 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 SPDYE16A6NNV3 312 aaPredicted RBP16.97■□□□□ 0.31
ABCF3-209ENST00000472608 GH2P01242 217 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 VCAM1P19320 739 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 SHMT1P34896 483 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 TDO2P48775 406 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 USP14P54578 494 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
ABCF3-209ENST00000472608 WDR78Q5VTH9 848 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 CCDC129Q6ZRS4 1044 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 C16orf86Q6ZW13 317 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 ZNF576Q9H609 170 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 PHF24Q9UPV7 400 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 ZNF236Q9UL36 1845 aa16.97■□□□□ 0.31
ABCF3-209ENST00000472608 BAZ2AQ9UIF9 1905 aaKnown RBP16.97■□□□□ 0.31
ABCF3-209ENST00000472608 ZMYM6O95789 1325 aa16.96■□□□□ 0.31
ABCF3-209ENST00000472608 FOXP2O15409 715 aa16.96■□□□□ 0.31
ABCF3-209ENST00000472608 CYP2D6P10635 497 aa16.96■□□□□ 0.31
ABCF3-209ENST00000472608 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms