RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 NUP88Q99567 741 aaPredicted RBP12.27□□□□□ -0.45
UBE2F-220ENST00000472479 VAT1LQ9HCJ6 419 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 SH2B1Q9NRF2 756 aaPredicted RBP12.27□□□□□ -0.45
UBE2F-220ENST00000472479 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 RBM28Q9NW13 759 aaKnown RBP12.27□□□□□ -0.45
UBE2F-220ENST00000472479 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.45
UBE2F-220ENST00000472479 MYH8P13535 1937 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 PAPPA2Q9BXP8 1791 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 TMEM232C9JQI7 657 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 GOLGA8HP0CJ92 632 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■■■□ 23.1
UBE2F-220ENST00000472479 FAM83BQ5T0W9 1011 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 CCDC83Q8IWF9 413 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 FBXL16Q8N461 479 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 NECAB1Q8N987 351 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 LPAR1Q92633 364 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 SYNPO2Q9UMS6 1093 aa12.26□□□□□ -0.45
UBE2F-220ENST00000472479 CCL15-CCL14A0A0B4J2E2 113 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 KLRF2D3W0D1 207 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 K7ELQ4 463 aaPredicted RBP12.25□□□□□ -0.45
UBE2F-220ENST00000472479 WDR46O15213 610 aaKnown RBP12.25□□□□□ -0.45
UBE2F-220ENST00000472479 ZBTB48P10074 688 aaPredicted RBP12.25□□□□□ -0.45
UBE2F-220ENST00000472479 PDHBP11177 359 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 DGKZQ13574 1117 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 PPP2R5BQ15173 497 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 CCL15Q16663 113 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 ME3Q16798 604 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 ASPRV1Q53RT3 343 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 GPATCH4Q5T3I0 446 aaKnown RBP12.25□□□□□ -0.45
UBE2F-220ENST00000472479 CYP4F22Q6NT55 531 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 RASAL3Q86YV0 1011 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 CHURC1Q8WUH1 139 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 PIBF1Q8WXW3 757 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 SNX21Q969T3 373 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 AGXT2Q9BYV1 514 aa12.25□□□□□ -0.45
UBE2F-220ENST00000472479 RPAP3Q9H6T3 665 aaPredicted RBP12.25□□□□□ -0.45
UBE2F-220ENST00000472479 MANSC4A6NHS7 340 aaPredicted RBP12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L15C9J2P7 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L13C9JLJ4 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L11C9JVI0 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L18D6R9N7 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L22D6RA61 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L17D6RBQ6 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L19D6RCP7 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L20D6RJB6 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 PFKFB2O60825 505 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 FLOT1O75955 427 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 CDKL5O76039 1030 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 OSBPP22059 807 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 ADD1P35611 737 aaKnown RBP12.24□□□□□ -0.45
UBE2F-220ENST00000472479 NOVP48745 357 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
UBE2F-220ENST00000472479 USP17L24Q0WX57 530 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 TROAPQ12815 778 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 GRM4Q14833 912 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 GMCL1Q96IK5 515 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 TMX3Q96JJ7 454 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 LZTS2Q9BRK4 669 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 NCOA5Q9HCD5 579 aaKnown RBP12.24□□□□□ -0.45
UBE2F-220ENST00000472479 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
UBE2F-220ENST00000472479 A0A0G2JLL6 359 aaPredicted RBP12.23□□□□□ -0.45
UBE2F-220ENST00000472479 CD2BP2O95400 341 aaKnown RBP12.23□□□□□ -0.45
UBE2F-220ENST00000472479 VCAM1P19320 739 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 SLC16A2P36021 539 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 GJA5P36382 358 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 STAT2P52630 851 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 SSRP1Q08945 709 aaKnown RBP12.23□□□□□ -0.45
UBE2F-220ENST00000472479 ZNF543Q08ER8 600 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 SH3D19Q5HYK7 790 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 PRRT2Q7Z6L0 340 aaPredicted RBP12.23□□□□□ -0.45
UBE2F-220ENST00000472479 FAM160B2Q86V87 743 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
UBE2F-220ENST00000472479 TRIM22Q8IYM9 498 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 CMTR1Q8N1G2 835 aaKnown RBP12.23□□□□□ -0.45
UBE2F-220ENST00000472479 PROCA1Q8NCQ7 364 aaPredicted RBP12.23□□□□□ -0.45
UBE2F-220ENST00000472479 HHIPL1Q96JK4 782 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 CAPNS2Q96L46 248 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 MAP3K14Q99558 947 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 FEM1BQ9UK73 627 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 KCNH4Q9UQ05 1017 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
UBE2F-220ENST00000472479 DOCK1Q14185 1865 aa12.23□□□□□ -0.45
UBE2F-220ENST00000472479 SLC10A3P09131 477 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 RCAN1P53805 252 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 EVCP57679 992 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 INHBEP58166 350 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 C1QTNF8P60827 252 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 SCRN1Q12765 414 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 TTBK2Q6IQ55 1244 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 HOMER1Q86YM7 354 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 STAG2Q8N3U4 1231 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 FAM184AQ8NB25 1140 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms