RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 EMILIN3Q9NT22 766 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 DOCK3Q8IZD9 2030 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 A0A1W2PRG0 241 aa14.09□□□□□ -0.15
CLRN1-205ENST00000472224 VCAM1P19320 739 aa14.09□□□□□ -0.15
CLRN1-205ENST00000472224 FLT3LGP49771 235 aa14.09□□□□□ -0.15
CLRN1-205ENST00000472224 ANKRD13CQ8N6S4 541 aa14.09□□□□□ -0.15
CLRN1-205ENST00000472224 KIAA1683Q9H0B3 1180 aa14.09□□□□□ -0.15
CLRN1-205ENST00000472224 SH2D4AQ9H788 454 aa14.09□□□□□ -0.15
CLRN1-205ENST00000472224 DNAH12Q6ZR08 3092 aa14.09□□□□□ -0.15
CLRN1-205ENST00000472224 RPTORQ8N122 1335 aa14.09□□□□□ -0.15
CLRN1-205ENST00000472224 FGAP02671 866 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 TSPY3P0CV98 308 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 TSPY8P0CW00 308 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.16
CLRN1-205ENST00000472224 ALX1Q15699 326 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 RRP12Q5JTH9 1297 aaKnown RBP14.08□□□□□ -0.16
CLRN1-205ENST00000472224 NECAB2Q7Z6G3 386 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 SPICE1Q8N0Z3 855 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 PXYLP1Q8TE99 480 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 C12orf42Q96LP6 360 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 RPAP3Q9H6T3 665 aaPredicted RBP14.08□□□□□ -0.16
CLRN1-205ENST00000472224 KANSL2Q9H9L4 492 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 PARP14Q460N5 1801 aa14.08□□□□□ -0.16
CLRN1-205ENST00000472224 TSPY2A6NKD2 308 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 CAPN2P17655 700 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 CHMLP26374 656 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 RUFY2Q8WXA3 655 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 TANGO6Q9C0B7 1094 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 IL25Q9H293 177 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 INCENPQ9NQS7 918 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 ZMYM6O95789 1325 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 RAD50Q92878 1312 aa14.07□□□□□ -0.16
CLRN1-205ENST00000472224 COL11A1P12107 1806 aaPredicted RBP14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L15C9J2P7 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L13C9JLJ4 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L11C9JVI0 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L18D6R9N7 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L22D6RA61 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L17D6RBQ6 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L19D6RCP7 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L20D6RJB6 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 HERVK_113P62684 666 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 TFAP4Q01664 338 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 USP17L24Q0WX57 530 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 IRF5Q13568 498 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 LRRC47Q8N1G4 583 aaKnown RBP14.06□□□□□ -0.16
CLRN1-205ENST00000472224 CEP95Q96GE4 821 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 P2RX7Q99572 595 aaKnown RBP14.06□□□□□ -0.16
CLRN1-205ENST00000472224 PAGR1Q9BTK6 254 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLRN1-205ENST00000472224 UBE2OQ9C0C9 1292 aaKnown RBP14.06□□□□□ -0.16
CLRN1-205ENST00000472224 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLRN1-205ENST00000472224 VCPKMTQ9H867 229 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLRN1-205ENST00000472224 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
CLRN1-205ENST00000472224 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 RANBP6O60518 1105 aaKnown RBP14.05□□□□□ -0.16
CLRN1-205ENST00000472224 PEX10O60683 326 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 HOXA7P31268 230 aaPredicted RBP14.05□□□□□ -0.16
CLRN1-205ENST00000472224 GCLCP48506 637 aaPredicted RBP14.05□□□□□ -0.16
CLRN1-205ENST00000472224 FAM110CQ1W6H9 321 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 KIAA1755Q5JYT7 1200 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 SIAH1Q8IUQ4 282 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 TBC1D10CQ8IV04 446 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 DSCC1Q9BVC3 393 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 GOPCQ9HD26 462 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 ANAPC4Q9UJX5 808 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 ISY1Q9ULR0 285 aaKnown RBP14.05□□□□□ -0.16
CLRN1-205ENST00000472224 TACC3Q9Y6A5 838 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 PLXNB2O15031 1838 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 RLFQ13129 1914 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 PLIN4Q96Q06 1357 aa14.05□□□□□ -0.16
CLRN1-205ENST00000472224 ZNF213O14771 459 aa14.04□□□□□ -0.16
CLRN1-205ENST00000472224 CATSPERGQ6ZRH7 1159 aa14.04□□□□□ -0.16
CLRN1-205ENST00000472224 ANKLE1Q8NAG6 615 aa14.04□□□□□ -0.16
CLRN1-205ENST00000472224 NEDD1Q8NHV4 660 aa14.04□□□□□ -0.16
CLRN1-205ENST00000472224 GTF3C2Q8WUA4 911 aaPredicted RBP14.04□□□□□ -0.16
CLRN1-205ENST00000472224 LPAR1Q92633 364 aa14.04□□□□□ -0.16
CLRN1-205ENST00000472224 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
CLRN1-205ENST00000472224 PPP4R2Q9NY27 417 aa14.04□□□□□ -0.16
CLRN1-205ENST00000472224 A0A0G2JMZ2 1700 aa14.04□□□□□ -0.16
CLRN1-205ENST00000472224 IGKV6D-41A0A0C4DH26 115 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
CLRN1-205ENST00000472224 ORC4O43929 436 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 NMT2O60551 498 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 FLOT1O75955 427 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 TTLL1O95922 423 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 IMMTQ16891 758 aaKnown RBP14.03□□□□□ -0.16
CLRN1-205ENST00000472224 FAM83BQ5T0W9 1011 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 AKNAD1Q5T1N1 836 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 FAM109BQ6ICB4 259 aaPredicted RBP14.03□□□□□ -0.16
CLRN1-205ENST00000472224 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 CHMP4CQ96CF2 233 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 NBPF3Q9H094 633 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 CWC22Q9HCG8 908 aaKnown RBP14.03□□□□□ -0.16
CLRN1-205ENST00000472224 TXNRD2Q9NNW7 524 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 MTMR4Q9NYA4 1195 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 NYAP2Q9P242 653 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms