RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 PFASO15067 1338 aa26.93■■□□□ 1.9
C9orf3-213ENST00000471978 ZNF236Q9UL36 1845 aa26.93■■□□□ 1.9
C9orf3-213ENST00000471978 FAM83BQ5T0W9 1011 aa26.93■■□□□ 1.9
C9orf3-213ENST00000471978 SEC62Q99442 399 aaKnown RBP26.93■■□□□ 1.9
C9orf3-213ENST00000471978 ZBTB47Q9UFB7 747 aaPredicted RBP26.93■■□□□ 1.9
C9orf3-213ENST00000471978 ADAMTS5Q9UNA0 930 aa26.93■■□□□ 1.9
C9orf3-213ENST00000471978 COBLO75128 1261 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 IGHA2P01877 340 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 COL6A1P12109 1028 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 OLFML2BQ68BL8 750 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 IFNL3Q8IZI9 196 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 ABRAQ8N0Z2 381 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 ZNF287Q9HBT7 754 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 SLC5A4Q9NY91 659 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 NYAP2Q9P242 653 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 DDX20Q9UHI6 824 aaKnown RBP26.92■■□□□ 1.9
C9orf3-213ENST00000471978 PARP14Q460N5 1801 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 DNAH12Q6ZR08 3092 aa26.92■■□□□ 1.9
C9orf3-213ENST00000471978 GREB1LQ9C091 1923 aaPredicted RBP26.92■■□□□ 1.9
C9orf3-213ENST00000471978 SLC25A27O95847 323 aa26.91■■□□□ 1.9
C9orf3-213ENST00000471978 ZNF444Q8N0Y2 327 aaPredicted RBP26.91■■□□□ 1.9
C9orf3-213ENST00000471978 TRPV1Q8NER1 839 aa26.91■■□□□ 1.9
C9orf3-213ENST00000471978 NACAP1Q9BZK3 213 aa26.91■■□□□ 1.9
C9orf3-213ENST00000471978 STAP2Q9UGK3 403 aa26.91■■□□□ 1.9
C9orf3-213ENST00000471978 PPP1R9AQ9ULJ8 1098 aa26.91■■□□□ 1.9
C9orf3-213ENST00000471978 ZMYND8Q9ULU4 1186 aaPredicted RBP26.91■■□□□ 1.9
C9orf3-213ENST00000471978 VWA5AO00534 786 aa26.9■■□□□ 1.9
C9orf3-213ENST00000471978 MSCO60682 206 aa26.9■■□□□ 1.9
C9orf3-213ENST00000471978 PRDM1O75626 825 aa26.9■■□□□ 1.9
C9orf3-213ENST00000471978 FCER1AP12319 257 aa26.9■■□□□ 1.9
C9orf3-213ENST00000471978 ANKRD45Q5TZF3 282 aa26.9■■□□□ 1.9
C9orf3-213ENST00000471978 CYBAP13498 195 aa26.89■■□□□ 1.9
C9orf3-213ENST00000471978 ZMYM1Q5SVZ6 1142 aa26.89■■□□□ 1.9
C9orf3-213ENST00000471978 NUP88Q99567 741 aaPredicted RBP26.89■■□□□ 1.9
C9orf3-213ENST00000471978 CLIP2Q9UDT6 1046 aa26.89■■□□□ 1.9
C9orf3-213ENST00000471978 F5H6K3 240 aa26.88■■□□□ 1.89
C9orf3-213ENST00000471978 STAT3P40763 770 aa26.88■■□□□ 1.89
C9orf3-213ENST00000471978 KLRC3Q07444 240 aa26.88■■□□□ 1.89
C9orf3-213ENST00000471978 RIOX2Q8IUF8 465 aa26.88■■□□□ 1.89
C9orf3-213ENST00000471978 SALL3Q9BXA9 1300 aa26.88■■□□□ 1.89
C9orf3-213ENST00000471978 IGKV6D-41A0A0C4DH26 115 aa26.87■■□□□ 1.89
C9orf3-213ENST00000471978 SLF1Q9BQI6 1058 aa26.87■■□□□ 1.89
C9orf3-213ENST00000471978 NAPBQ9H115 298 aa26.87■■□□□ 1.89
C9orf3-213ENST00000471978 COL11A1P12107 1806 aaPredicted RBP26.87■■□□□ 1.89
C9orf3-213ENST00000471978 FRMPD3Q5JV73 1810 aa26.87■■□□□ 1.89
C9orf3-213ENST00000471978 A0A1W2PPC1 479 aa26.86■■□□□ 1.89
C9orf3-213ENST00000471978 NDUFB10O96000 172 aa26.86■■□□□ 1.89
C9orf3-213ENST00000471978 SYN1P17600 705 aa26.86■■□□□ 1.89
C9orf3-213ENST00000471978 REPS2Q8NFH8 660 aa26.86■■□□□ 1.89
C9orf3-213ENST00000471978 MAML3Q96JK9 1138 aa26.86■■□□□ 1.89
C9orf3-213ENST00000471978 YTHDC1Q96MU7 727 aaKnown RBP26.86■■□□□ 1.89
C9orf3-213ENST00000471978 MMP19Q99542 508 aa26.86■■□□□ 1.89
C9orf3-213ENST00000471978 ZNF214Q9UL59 606 aaPredicted RBP26.86■■□□□ 1.89
C9orf3-213ENST00000471978 LAMA3Q16787 3333 aa26.85■■□□□ 1.89
C9orf3-213ENST00000471978 SLC3A2P08195 630 aaKnown RBP26.85■■□□□ 1.89
C9orf3-213ENST00000471978 PDE4BQ07343 736 aa26.85■■□□□ 1.89
C9orf3-213ENST00000471978 HDAC1Q13547 482 aaPredicted RBP26.85■■□□□ 1.89
C9orf3-213ENST00000471978 LRRC26Q2I0M4 334 aa26.85■■□□□ 1.89
C9orf3-213ENST00000471978 CEP95Q96GE4 821 aa26.85■■□□□ 1.89
C9orf3-213ENST00000471978 GDF15Q99988 308 aa26.85■■□□□ 1.89
C9orf3-213ENST00000471978 SENP6Q9GZR1 1112 aaPredicted RBP26.85■■□□□ 1.89
C9orf3-213ENST00000471978 MTMR4Q9NYA4 1195 aa26.85■■□□□ 1.89
C9orf3-213ENST00000471978 COPB2P35606 906 aa26.84■■□□□ 1.89
C9orf3-213ENST00000471978 PPARAQ07869 468 aa26.84■■□□□ 1.89
C9orf3-213ENST00000471978 KCTD2Q14681 263 aa26.84■■□□□ 1.89
C9orf3-213ENST00000471978 MKL1Q969V6 931 aa26.84■■□□□ 1.89
C9orf3-213ENST00000471978 DNM1LO00429 736 aa26.83■■□□□ 1.89
C9orf3-213ENST00000471978 SEPT4O43236 478 aa26.83■■□□□ 1.89
C9orf3-213ENST00000471978 TTLL1O95922 423 aa26.83■■□□□ 1.89
C9orf3-213ENST00000471978 PGK2P07205 417 aa26.83■■□□□ 1.89
C9orf3-213ENST00000471978 TSPY3P0CV98 308 aa26.83■■□□□ 1.89
C9orf3-213ENST00000471978 TSPY8P0CW00 308 aa26.83■■□□□ 1.89
C9orf3-213ENST00000471978 PRAMEF19Q5SWL8 479 aa26.83■■□□□ 1.89
C9orf3-213ENST00000471978 CCDC129Q6ZRS4 1044 aa26.83■■□□□ 1.89
C9orf3-213ENST00000471978 PRPF38AQ8NAV1 312 aaKnown RBP26.83■■□□□ 1.89
C9orf3-213ENST00000471978 BMP8BP34820 402 aa26.82■■□□□ 1.88
C9orf3-213ENST00000471978 ANO1Q5XXA6 986 aa26.82■■□□□ 1.88
C9orf3-213ENST00000471978 NEDD1Q8NHV4 660 aa26.82■■□□□ 1.88
C9orf3-213ENST00000471978 EVI5LQ96CN4 794 aa26.82■■□□□ 1.88
C9orf3-213ENST00000471978 PDE1AP54750 535 aa26.81■■□□□ 1.88
C9orf3-213ENST00000471978 TFAP4Q01664 338 aa26.81■■□□□ 1.88
C9orf3-213ENST00000471978 FAM47AQ5JRC9 791 aa26.81■■□□□ 1.88
C9orf3-213ENST00000471978 LRRC47Q8N1G4 583 aaKnown RBP26.81■■□□□ 1.88
C9orf3-213ENST00000471978 ARRDC4Q8NCT1 418 aa26.81■■□□□ 1.88
C9orf3-213ENST00000471978 TEX13BQ9BXU2 312 aa26.81■■□□□ 1.88
C9orf3-213ENST00000471978 SYNPO2Q9UMS6 1093 aa26.81■■□□□ 1.88
C9orf3-213ENST00000471978 PLIN4Q96Q06 1357 aa26.81■■□□□ 1.88
C9orf3-213ENST00000471978 ZNFX1Q9P2E3 1918 aaKnown RBP26.8■■□□□ 1.88
C9orf3-213ENST00000471978 MYH4Q9Y623 1939 aa26.8■■□□□ 1.88
C9orf3-213ENST00000471978 MAGEA10P43363 369 aaPredicted RBP26.8■■□□□ 1.88
C9orf3-213ENST00000471978 ZNF792Q3KQV3 632 aa26.8■■□□□ 1.88
C9orf3-213ENST00000471978 GJC2Q5T442 439 aaPredicted RBP26.8■■□□□ 1.88
C9orf3-213ENST00000471978 SNRNP48Q6IEG0 339 aaKnown RBP26.8■■□□□ 1.88
C9orf3-213ENST00000471978 GMCL1P1Q8NEA9 526 aa26.8■■□□□ 1.88
C9orf3-213ENST00000471978 DIS3Q9Y2L1 958 aaKnown RBP26.8■■□□□ 1.88
C9orf3-213ENST00000471978 FOXP2O15409 715 aa26.79■■□□□ 1.88
C9orf3-213ENST00000471978 ZBED4O75132 1171 aa26.79■■□□□ 1.88
C9orf3-213ENST00000471978 KIFC2Q96AC6 838 aa26.79■■□□□ 1.88
C9orf3-213ENST00000471978 FEM1BQ9UK73 627 aa26.79■■□□□ 1.88
C9orf3-213ENST00000471978 CTDP1Q9Y5B0 961 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms